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Items: 1 to 20 of 106

1.

Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

Taroncher-Oldenburg G, Griner EM, Francis CA, Ward BB.

Appl Environ Microbiol. 2003 Feb;69(2):1159-71.

2.

Development and evaluation of functional gene arrays for detection of selected genes in the environment.

Wu L, Thompson DK, Li G, Hurt RA, Tiedje JM, Zhou J.

Appl Environ Microbiol. 2001 Dec;67(12):5780-90.

3.

Ammonia-oxidizing bacterial community composition in estuarine and oceanic environments assessed using a functional gene microarray.

Ward BB, Eveillard D, Kirshtein JD, Nelson JD, Voytek MA, Jackson GA.

Environ Microbiol. 2007 Oct;9(10):2522-38.

PMID:
17803777
4.

Spatial-temporal variability in diazotroph assemblages in Chesapeake Bay using an oligonucleotide nifH microarray.

Moisander PH, Morrison AE, Ward BB, Jenkins BD, Zehr JP.

Environ Microbiol. 2007 Jul;9(7):1823-35.

PMID:
17564615
5.

Sediment denitrifier community composition and nirS gene expression investigated with functional gene microarrays.

Bulow SE, Francis CA, Jackson GA, Ward BB.

Environ Microbiol. 2008 Nov;10(11):3057-69. doi: 10.1111/j.1462-2920.2008.01765.x.

PMID:
18973624
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8.

Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone.

Oakley BB, Francis CA, Roberts KJ, Fuchsman CA, Srinivasan S, Staley JT.

Environ Microbiol. 2007 Jan;9(1):118-30.

PMID:
17227417
9.

Design and testing of 'genome-proxy' microarrays to profile marine microbial communities.

Rich VI, Konstantinidis K, DeLong EF.

Environ Microbiol. 2008 Feb;10(2):506-21. Epub 2007 Nov 19.

PMID:
18028413
10.

Nitrifier and denitrifier molecular operational taxonomic unit compositions from sites of a freshwater estuary of Chesapeake Bay.

Fortunato CS, Carlini DB, Ewers E, Bushaw-Newton KL.

Can J Microbiol. 2009 Mar;55(3):333-46. doi: 10.1139/w08-124.

PMID:
19370077
11.

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples.

Tiquia SM, Wu L, Chong SC, Passovets S, Xu D, Xu Y, Zhou J.

Biotechniques. 2004 Apr;36(4):664-70, 672, 674-5.

PMID:
15088384
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13.

Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland.

Kandeler E, Deiglmayr K, Tscherko D, Bru D, Philippot L.

Appl Environ Microbiol. 2006 Sep;72(9):5957-62.

14.

[Phylogeny diversity of the nitrite reductase gene (nirS) in the sediments of the eutrophic East Lake, Wuhan].

Cheng Z, Yang J, Li H, Zhu B, Chen X, Yan Y.

Wei Sheng Wu Xue Bao. 2011 May;51(5):667-75. Chinese.

PMID:
21800630
15.

Archaeal ammonia oxidizers and nirS-type denitrifiers dominate sediment nitrifying and denitrifying populations in a subtropical macrotidal estuary.

Abell GC, Revill AT, Smith C, Bissett AP, Volkman JK, Robert SS.

ISME J. 2010 Feb;4(2):286-300. doi: 10.1038/ismej.2009.105. Epub 2009 Oct 1.

PMID:
19798039
16.

Construction of a consortium comprising ammonia-oxidizing bacteria and denitrifying bacteria isolated from marine sediment.

Nakano M, Shimizu Y, Okumura H, Sugahara I, Maeda H.

Biocontrol Sci. 2008 Sep;13(3):73-89.

PMID:
18839627
17.

Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer.

Santoro AE, Boehm AB, Francis CA.

Appl Environ Microbiol. 2006 Mar;72(3):2102-9.

18.

Denitrification and the denitrifier community in coastal microbial mats.

Fan H, Bolhuis H, Stal LJ.

FEMS Microbiol Ecol. 2015 Mar;91(3). pii: fiu033. doi: 10.1093/femsec/fiu033. Epub 2014 Dec 24.

19.

Microarray-based characterization of microbial community functional structure and heterogeneity in marine sediments from the Gulf of Mexico.

Wu L, Kellogg L, Devol AH, Tiedje JM, Zhou J.

Appl Environ Microbiol. 2008 Jul;74(14):4516-29. doi: 10.1128/AEM.02751-07. Epub 2008 May 30.

20.

Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary.

Santoro AE, Francis CA, de Sieyes NR, Boehm AB.

Environ Microbiol. 2008 Apr;10(4):1068-79. doi: 10.1111/j.1462-2920.2007.01547.x. Epub 2008 Feb 3.

PMID:
18266758
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