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Items: 1 to 20 of 89

1.

Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning.

Ohnishi M, Terajima J, Kurokawa K, Nakayama K, Murata T, Tamura K, Ogura Y, Watanabe H, Hayashi T.

Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):17043-8. Epub 2002 Dec 12.

2.

Complexity of the genomic diversity in enterohemorrhagic Escherichia coli O157 revealed by the combinational use of the O157 Sakai OligoDNA microarray and the Whole Genome PCR scanning.

Ogura Y, Kurokawa K, Ooka T, Tashiro K, Tobe T, Ohnishi M, Nakayama K, Morimoto T, Terajima J, Watanabe H, Kuhara S, Hayashi T.

DNA Res. 2006 Feb 28;13(1):3-14. Epub 2006 Feb 22.

3.

Diversification of Escherichia coli genomes: are bacteriophages the major contributors?

Ohnishi M, Kurokawa K, Hayashi T.

Trends Microbiol. 2001 Oct;9(10):481-5.

PMID:
11597449
4.

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

Hayashi T, Makino K, Ohnishi M, Kurokawa K, Ishii K, Yokoyama K, Han CG, Ohtsubo E, Nakayama K, Murata T, Tanaka M, Tobe T, Iida T, Takami H, Honda T, Sasakawa C, Ogasawara N, Yasunaga T, Kuhara S, Shiba T, Hattori M, Shinagawa H.

DNA Res. 2001 Feb 28;8(1):11-22. Erratum in: DNA Res 2001 Apr 27;8(2):96.

5.

Genome evolution in major Escherichia coli O157:H7 lineages.

Zhang Y, Laing C, Steele M, Ziebell K, Johnson R, Benson AK, Taboada E, Gannon VP.

BMC Genomics. 2007 May 16;8:121.

6.

The defective prophage pool of Escherichia coli O157: prophage-prophage interactions potentiate horizontal transfer of virulence determinants.

Asadulghani M, Ogura Y, Ooka T, Itoh T, Sawaguchi A, Iguchi A, Nakayama K, Hayashi T.

PLoS Pathog. 2009 May;5(5):e1000408. doi: 10.1371/journal.ppat.1000408. Epub 2009 May 1.

7.

Identification of Escherichia coli O157:H7 genomic regions conserved in strains with a genotype associated with human infection.

Steele M, Ziebell K, Zhang Y, Benson A, Konczy P, Johnson R, Gannon V.

Appl Environ Microbiol. 2007 Jan;73(1):22-31. Epub 2006 Oct 20.

8.

[Genetic diversity of enterohemorrhagic Escherichia coli].

Ohnishi M, Hayashi T.

Nihon Rinsho. 2002 Jun;60(6):1077-82. Review. Japanese.

PMID:
12078076
9.

Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7.

Wick LM, Qi W, Lacher DW, Whittam TS.

J Bacteriol. 2005 Mar;187(5):1783-91.

10.

In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence.

Laing CR, Buchanan C, Taboada EN, Zhang Y, Karmali MA, Thomas JE, Gannon VP.

BMC Genomics. 2009 Jun 29;10:287. doi: 10.1186/1471-2164-10-287.

11.

Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage.

Kyle JL, Cummings CA, Parker CT, Quiñones B, Vatta P, Newton E, Huynh S, Swimley M, Degoricija L, Barker M, Fontanoz S, Nguyen K, Patel R, Fang R, Tebbs R, Petrauskene O, Furtado M, Mandrell RE.

J Bacteriol. 2012 Apr;194(8):1885-96. doi: 10.1128/JB.00120-12. Epub 2012 Feb 10.

12.

Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: integrations, excisions, truncations, and evolutionary implications.

Shaikh N, Tarr PI.

J Bacteriol. 2003 Jun;185(12):3596-605. Erratum in: J Bacteriol. 2003 Nov;185(21):6495.

13.

[Molecular epidemiology of enterohaemorrhagic Esacherichia coli O157 in some areas in China].

Wang LL, Xia SL, Hu WF, Gu L, Yang JC, Chen Q, Cui ZG, Xu YM, Wang X, Ye CY, Jing HQ, Xu JG.

Zhonghua Liu Xing Bing Xue Za Zhi. 2008 Jan;29(1):55-8. Chinese.

PMID:
18785480
14.

Genomic diversity of pathogenic Escherichia coli of the EHEC 2 clonal complex.

Abu-Ali GS, Lacher DW, Wick LM, Qi W, Whittam TS.

BMC Genomics. 2009 Jul 3;10:296. doi: 10.1186/1471-2164-10-296.

15.

High genomic diversity of enterohemorrhagic Escherichia coli isolates in Japan and its applicability for the detection of diffuse outbreak.

Terajima J, Izumiya H, Iyoda S, Tamura K, Watanabe H.

Jpn J Infect Dis. 2002 Feb;55(1):19-22.

PMID:
11971157
16.

Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes.

Ogura Y, Ooka T, Asadulghani, Terajima J, Nougayrède JP, Kurokawa K, Tashiro K, Tobe T, Nakayama K, Kuhara S, Oswald E, Watanabe H, Hayashi T.

Genome Biol. 2007;8(7):R138.

17.

Chromosomal dynamism in progeny of outbreak-related sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM.

Bielaszewska M, Prager R, Zhang W, Friedrich AW, Mellmann A, Tschäpe H, Karch H.

Appl Environ Microbiol. 2006 Mar;72(3):1900-9.

18.

[Genomic diversity of Escherichia coli].

Ohnishi M.

Nihon Saikingaku Zasshi. 2004 Aug;59(3):449-55. Review. Japanese. No abstract available.

PMID:
15484809
19.

Genomic variability of O islands encoding tellurite resistance in enterohemorrhagic Escherichia coli O157:H7 isolates.

Taylor DE, Rooker M, Keelan M, Ng LK, Martin I, Perna NT, Burland NT, Blattner FR.

J Bacteriol. 2002 Sep;184(17):4690-8.

20.

Diversity of stx2 converting bacteriophages induced from Shiga-toxin-producing Escherichia coli strains isolated from cattle.

Muniesa M, Blanco JE, De Simón M, Serra-Moreno R, Blanch AR, Jofre J.

Microbiology. 2004 Sep;150(Pt 9):2959-71.

PMID:
15347754
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