Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 69

1.

Discovering new genes with advanced homology detection.

Li W, Godzik A.

Trends Biotechnol. 2002 Aug;20(8):315-6.

PMID:
12127268
[PubMed - indexed for MEDLINE]
2.

QAlign: quality-based multiple alignments with dynamic phylogenetic analysis.

Sammeth M, Rothgänger J, Esser W, Albert J, Stoye J, Harmsen D.

Bioinformatics. 2003 Aug 12;19(12):1592-3.

PMID:
12912847
[PubMed - indexed for MEDLINE]
Free Article
3.

Using guide trees to construct multiple-sequence evolutionary HMMs.

Holmes I.

Bioinformatics. 2003;19 Suppl 1:i147-57.

PMID:
12855451
[PubMed - indexed for MEDLINE]
Free Article
4.

JIGSAW: integration of multiple sources of evidence for gene prediction.

Allen JE, Salzberg SL.

Bioinformatics. 2005 Sep 15;21(18):3596-603. Epub 2005 Aug 2.

PMID:
16076884
[PubMed - indexed for MEDLINE]
Free Article
5.

Genescript: DNA sequence annotation pipeline.

Hudek AK, Cheung J, Boright AP, Scherer SW.

Bioinformatics. 2003 Jun 12;19(9):1177-8.

PMID:
12801881
[PubMed - indexed for MEDLINE]
Free Article
6.

In silico study of breast cancer associated gene 3 using LION Target Engine and other tools.

León DA, Cànaves JM.

Biotechniques. 2003 Dec;35(6):1222-6, 1228, 1230-1.

PMID:
14682057
[PubMed - indexed for MEDLINE]
7.

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets.

Pertea G, Huang X, Liang F, Antonescu V, Sultana R, Karamycheva S, Lee Y, White J, Cheung F, Parvizi B, Tsai J, Quackenbush J.

Bioinformatics. 2003 Mar 22;19(5):651-2.

PMID:
12651724
[PubMed - indexed for MEDLINE]
Free Article
8.

The new role of SAGE in gene discovery.

Boheler KR, Stern MD.

Trends Biotechnol. 2003 Feb;21(2):55-7; discussion 57-8. Review.

PMID:
12573851
[PubMed - indexed for MEDLINE]
9.

Multiple-sequence functional annotation and the generalized hidden Markov phylogeny.

McAuliffe JD, Pachter L, Jordan MI.

Bioinformatics. 2004 Aug 12;20(12):1850-60. Epub 2004 Feb 26.

PMID:
14988105
[PubMed - indexed for MEDLINE]
Free Article
10.

Digital extractor: analysis of digital differential display output.

Madden SF, O'Donovan B, Furney SJ, Brady HR, Silvestre G, Doran PP.

Bioinformatics. 2003 Aug 12;19(12):1594-5.

PMID:
12912848
[PubMed - indexed for MEDLINE]
Free Article
11.

COACH: profile-profile alignment of protein families using hidden Markov models.

Edgar RC, Sjölander K.

Bioinformatics. 2004 May 22;20(8):1309-18. Epub 2004 Feb 12.

PMID:
14962937
[PubMed - indexed for MEDLINE]
Free Article
12.

SSHSuite: an integrated software package for analysis of large-scale suppression subtractive hybridization data.

Weckx S, De Rijk P, Van Broeckhoven C, Del-Favero J.

Biotechniques. 2004 Jun;36(6):1043-5.

PMID:
15211756
[PubMed - indexed for MEDLINE]
13.

ClustalW-MPI: ClustalW analysis using distributed and parallel computing.

Li KB.

Bioinformatics. 2003 Aug 12;19(12):1585-6.

PMID:
12912844
[PubMed - indexed for MEDLINE]
Free Article
14.

A hidden Markov model for progressive multiple alignment.

Löytynoja A, Milinkovitch MC.

Bioinformatics. 2003 Aug 12;19(12):1505-13.

PMID:
12912831
[PubMed - indexed for MEDLINE]
Free Article
15.

A comparative analysis of HGSC and Celera human genome assemblies and gene sets.

Li S, Cutler G, Liu JJ, Hoey T, Chen L, Schultz PG, Liao J, Ling XB.

Bioinformatics. 2003 Sep 1;19(13):1597-605.

PMID:
12967954
[PubMed - indexed for MEDLINE]
Free Article
16.

GrailEXP and Genome Analysis Pipeline for genome annotation.

Uberbacher EC, Hyatt D, Shah M.

Curr Protoc Bioinformatics. 2004 Feb;Chapter 4:Unit4.9. doi: 10.1002/0471250953.bi0409s04.

PMID:
18428726
[PubMed - indexed for MEDLINE]
17.

Protein-based analysis of alternative splicing in the human genome.

Loraine AE, Helt GA, Cline MS, Siani-Rose MA.

Proc IEEE Comput Soc Bioinform Conf. 2002;1:118-24.

PMID:
15838129
[PubMed - indexed for MEDLINE]
18.

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

Majoros WH, Pertea M, Salzberg SL.

Bioinformatics. 2004 Nov 1;20(16):2878-9. Epub 2004 May 14.

PMID:
15145805
[PubMed - indexed for MEDLINE]
Free Article
19.

Design and assessment of a fast algorithm for identifying specific probes for human and mouse genes.

Chang PC, Peck K.

Bioinformatics. 2003 Jul 22;19(11):1311-7.

PMID:
12874041
[PubMed - indexed for MEDLINE]
Free Article
20.

The CRASSS plug-in for integrating annotation data with hierarchical clustering results.

Buehler EC, Sachs JR, Shao K, Bagchi A, Ungar LH.

Bioinformatics. 2004 Nov 22;20(17):3266-9. Epub 2004 Jun 16.

PMID:
15201188
[PubMed - indexed for MEDLINE]
Free Article
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk