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Results: 1 to 20 of 84

1.

Novel vertebrate genes and putative regulatory elements identified at kidney disease and NR2E1/fierce loci.

Abrahams BS, Mak GM, Berry ML, Palmquist DL, Saionz JR, Tay A, Tan YH, Brenner S, Simpson EM, Venkatesh B.

Genomics. 2002 Jul;80(1):45-53.

PMID:
12079282
[PubMed - indexed for MEDLINE]
2.

Fugu and human sequence comparison identifies novel human genes and conserved non-coding sequences.

Gilligan P, Brenner S, Venkatesh B.

Gene. 2002 Jul 10;294(1-2):35-44.

PMID:
12234665
[PubMed - indexed for MEDLINE]
3.

Pathological aggression in "fierce" mice corrected by human nuclear receptor 2E1.

Abrahams BS, Kwok MC, Trinh E, Budaghzadeh S, Hossain SM, Simpson EM.

J Neurosci. 2005 Jul 6;25(27):6263-70. Erratum in: J Neurosci. 2005 Aug 3;25(31):table of contents.

PMID:
16000615
[PubMed - indexed for MEDLINE]
Free Article
4.

Comparative genomics of the SOX9 region in human and Fugu rubripes: conservation of short regulatory sequence elements within large intergenic regions.

Bagheri-Fam S, Ferraz C, Demaille J, Scherer G, Pfeifer D.

Genomics. 2001 Nov;78(1-2):73-82.

PMID:
11707075
[PubMed - indexed for MEDLINE]
5.
6.

Genomic sequence analysis of Fugu rubripes CFTR and flanking genes in a 60 kb region conserving synteny with 800 kb of human chromosome 7.

Davidson H, Taylor MS, Doherty A, Boyd AC, Porteous DJ.

Genome Res. 2000 Aug;10(8):1194-203.

PMID:
10958637
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Strong conservation of the human NF2 locus based on sequence comparison in five species.

Hansson CM, Ali H, Bruder CE, Fransson I, Kluge S, Andersson B, Roe BA, Menzel U, Dumanski JP.

Mamm Genome. 2003 Aug;14(8):526-36.

PMID:
12925885
[PubMed - indexed for MEDLINE]
8.

Detecting conserved regulatory elements with the model genome of the Japanese puffer fish, Fugu rubripes.

Aparicio S, Morrison A, Gould A, Gilthorpe J, Chaudhuri C, Rigby P, Krumlauf R, Brenner S.

Proc Natl Acad Sci U S A. 1995 Feb 28;92(5):1684-8.

PMID:
7878040
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genomic characterization of the RUNX2 gene of Fugu rubripes.

Eggers JH, Stock M, Fliegauf M, Vonderstrass B, Otto F.

Gene. 2002 May 29;291(1-2):159-67.

PMID:
12095689
[PubMed - indexed for MEDLINE]
10.

Comparative analysis of vertebrate Shh genes identifies novel conserved non-coding sequence.

Goode DK, Snell P, Elgar G.

Mamm Genome. 2003 Mar;14(3):192-201.

PMID:
12647242
[PubMed - indexed for MEDLINE]
11.

Comparative genomics using fugu: a tool for the identification of conserved vertebrate cis-regulatory elements.

Venkatesh B, Yap WH.

Bioessays. 2005 Jan;27(1):100-7. Review.

PMID:
15612032
[PubMed - indexed for MEDLINE]
12.

Cloning, genomic organization, alternative transcripts and expression analysis of CD99L2, a novel paralog of human CD99, and identification of evolutionary conserved motifs.

Suh YH, Shin YK, Kook MC, Oh KI, Park WS, Kim SH, Lee IS, Park HJ, Huh TL, Park SH.

Gene. 2003 Mar 27;307:63-76.

PMID:
12706889
[PubMed - indexed for MEDLINE]
13.

Mutation and evolutionary analyses identify NR2E1-candidate-regulatory mutations in humans with severe cortical malformations.

Kumar RA, Leach S, Bonaguro R, Chen J, Yokom DW, Abrahams BS, Seaver L, Schwartz CE, Dobyns W, Brooks-Wilson A, Simpson EM.

Genes Brain Behav. 2007 Aug;6(6):503-16. Epub 2006 Nov 29.

PMID:
17054721
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Characterisation, expression and promoter analysis of an interleukin 10 homologue in the puffer fish, Fugu rubripes.

Zou J, Clark MS, Secombes CJ.

Immunogenetics. 2003 Aug;55(5):325-35. Epub 2003 Jul 4.

PMID:
12845498
[PubMed - indexed for MEDLINE]
15.

Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes.

Aparicio S, Chapman J, Stupka E, Putnam N, Chia JM, Dehal P, Christoffels A, Rash S, Hoon S, Smit A, Gelpke MD, Roach J, Oh T, Ho IY, Wong M, Detter C, Verhoef F, Predki P, Tay A, Lucas S, Richardson P, Smith SF, Clark MS, Edwards YJ, Doggett N, Zharkikh A, Tavtigian SV, Pruss D, Barnstead M, Evans C, Baden H, Powell J, Glusman G, Rowen L, Hood L, Tan YH, Elgar G, Hawkins T, Venkatesh B, Rokhsar D, Brenner S.

Science. 2002 Aug 23;297(5585):1301-10. Epub 2002 Jul 25.

PMID:
12142439
[PubMed - indexed for MEDLINE]
Free Article
16.

Identification of the putative collagen X gene from the pufferfish Fugu rubripes.

Woods A, James C, Underhill TM, Beier F; CIHR Group in Skeletal Development and Remodeling.

Gene. 2004 Nov 10;342(1):77-83.

PMID:
15573454
[PubMed - indexed for MEDLINE]
17.

Comparative genomics of the Hlx homeobox gene and protein: conservation of structure and expression from fish to mammals.

Bates MD, Wells JM, Venkatesh B.

Gene. 2005 Jun 6;352:45-56.

PMID:
15935575
[PubMed - indexed for MEDLINE]
18.

Zygote arrest 1 (Zar1) is an evolutionarily conserved gene expressed in vertebrate ovaries.

Wu X, Wang P, Brown CA, Zilinski CA, Matzuk MM.

Biol Reprod. 2003 Sep;69(3):861-7. Epub 2003 May 28.

PMID:
12773403
[PubMed - indexed for MEDLINE]
Free Article
19.

Specificity of DNA-binding by the FAX-1 and NHR-67 nuclear receptors of Caenorhabditis elegans is partially mediated via a subclass-specific P-box residue.

DeMeo SD, Lombel RM, Cronin M, Smith EL, Snowflack DR, Reinert K, Clever S, Wightman B.

BMC Mol Biol. 2008 Jan 7;9:2. doi: 10.1186/1471-2199-9-2.

PMID:
18179707
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Characterization of the pufferfish Otx2 cis-regulators reveals evolutionarily conserved genetic mechanisms for vertebrate head specification.

Kimura-Yoshida C, Kitajima K, Oda-Ishii I, Tian E, Suzuki M, Yamamoto M, Suzuki T, Kobayashi M, Aizawa S, Matsuo I.

Development. 2004 Jan;131(1):57-71. Epub 2003 Nov 26.

PMID:
14645121
[PubMed - indexed for MEDLINE]
Free Article

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