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Results: 1 to 20 of 120

1.

Functional organization of the yeast proteome by systematic analysis of protein complexes.

Gavin AC, Bösche M, Krause R, Grandi P, Marzioch M, Bauer A, Schultz J, Rick JM, Michon AM, Cruciat CM, Remor M, Höfert C, Schelder M, Brajenovic M, Ruffner H, Merino A, Klein K, Hudak M, Dickson D, Rudi T, Gnau V, Bauch A, Bastuck S, Huhse B, Leutwein C, Heurtier MA, Copley RR, Edelmann A, Querfurth E, Rybin V, Drewes G, Raida M, Bouwmeester T, Bork P, Seraphin B, Kuster B, Neubauer G, Superti-Furga G.

Nature. 2002 Jan 10;415(6868):141-7.

PMID:
11805826
[PubMed - indexed for MEDLINE]
2.

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Krogan NJ, Cagney G, Yu H, Zhong G, Guo X, Ignatchenko A, Li J, Pu S, Datta N, Tikuisis AP, Punna T, Peregrín-Alvarez JM, Shales M, Zhang X, Davey M, Robinson MD, Paccanaro A, Bray JE, Sheung A, Beattie B, Richards DP, Canadien V, Lalev A, Mena F, Wong P, Starostine A, Canete MM, Vlasblom J, Wu S, Orsi C, Collins SR, Chandran S, Haw R, Rilstone JJ, Gandi K, Thompson NJ, Musso G, St Onge P, Ghanny S, Lam MH, Butland G, Altaf-Ul AM, Kanaya S, Shilatifard A, O'Shea E, Weissman JS, Ingles CJ, Hughes TR, Parkinson J, Gerstein M, Wodak SJ, Emili A, Greenblatt JF.

Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.

PMID:
16554755
[PubMed - indexed for MEDLINE]
3.

An efficient protein complex purification method for functional proteomics in higher eukaryotes.

Forler D, Köcher T, Rode M, Gentzel M, Izaurralde E, Wilm M.

Nat Biotechnol. 2003 Jan;21(1):89-92. Epub 2002 Dec 16.

PMID:
12483225
[PubMed - indexed for MEDLINE]
4.

Proteome survey reveals modularity of the yeast cell machinery.

Gavin AC, Aloy P, Grandi P, Krause R, Boesche M, Marzioch M, Rau C, Jensen LJ, Bastuck S, Dümpelfeld B, Edelmann A, Heurtier MA, Hoffman V, Hoefert C, Klein K, Hudak M, Michon AM, Schelder M, Schirle M, Remor M, Rudi T, Hooper S, Bauer A, Bouwmeester T, Casari G, Drewes G, Neubauer G, Rick JM, Kuster B, Bork P, Russell RB, Superti-Furga G.

Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.

PMID:
16429126
[PubMed - indexed for MEDLINE]
5.

Novel interactions of Saccharomyces cerevisiae type 1 protein phosphatase identified by single-step affinity purification and mass spectrometry.

Walsh EP, Lamont DJ, Beattie KA, Stark MJ.

Biochemistry. 2002 Feb 19;41(7):2409-20.

PMID:
11841235
[PubMed - indexed for MEDLINE]
6.

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.

Ho Y, Gruhler A, Heilbut A, Bader GD, Moore L, Adams SL, Millar A, Taylor P, Bennett K, Boutilier K, Yang L, Wolting C, Donaldson I, Schandorff S, Shewnarane J, Vo M, Taggart J, Goudreault M, Muskat B, Alfarano C, Dewar D, Lin Z, Michalickova K, Willems AR, Sassi H, Nielsen PA, Rasmussen KJ, Andersen JR, Johansen LE, Hansen LH, Jespersen H, Podtelejnikov A, Nielsen E, Crawford J, Poulsen V, Sørensen BD, Matthiesen J, Hendrickson RC, Gleeson F, Pawson T, Moran MF, Durocher D, Mann M, Hogue CW, Figeys D, Tyers M.

Nature. 2002 Jan 10;415(6868):180-3.

PMID:
11805837
[PubMed - indexed for MEDLINE]
7.

Deciphering protein complexes and protein interaction networks by tandem affinity purification and mass spectrometry: analytical perspective.

Shevchenko A, Schaft D, Roguev A, Pijnappel WW, Stewart AF, Shevchenko A.

Mol Cell Proteomics. 2002 Mar;1(3):204-12.

PMID:
12096120
[PubMed - indexed for MEDLINE]
Free Article
8.

An integrated workflow for charting the human interaction proteome: insights into the PP2A system.

Glatter T, Wepf A, Aebersold R, Gstaiger M.

Mol Syst Biol. 2009;5:237. doi: 10.1038/msb.2008.75. Epub 2009 Jan 20.

PMID:
19156129
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Identification and characterization of protein subcomplexes in yeast.

Hollunder J, Beyer A, Wilhelm T.

Proteomics. 2005 May;5(8):2082-9.

PMID:
15832363
[PubMed - indexed for MEDLINE]
10.

Analyzing yeast protein-protein interaction data obtained from different sources.

Bader GD, Hogue CW.

Nat Biotechnol. 2002 Oct;20(10):991-7.

PMID:
12355115
[PubMed - indexed for MEDLINE]
11.

Tandem affinity purification and identification of protein complex components.

Gould KL, Ren L, Feoktistova AS, Jennings JL, Link AJ.

Methods. 2004 Jul;33(3):239-44.

PMID:
15157891
[PubMed - indexed for MEDLINE]
12.

A comparative analysis of an orthologous proteomic environment in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Roguev A, Shevchenko A, Schaft D, Thomas H, Stewart AF, Shevchenko A.

Mol Cell Proteomics. 2004 Feb;3(2):125-32. Epub 2003 Nov 15.

PMID:
14617822
[PubMed - indexed for MEDLINE]
Free Article
13.

A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.

Hart GT, Lee I, Marcotte ER.

BMC Bioinformatics. 2007 Jul 2;8:236.

PMID:
17605818
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Systematic characterization of the protein interaction network and protein complexes in Saccharomyces cerevisiae using tandem affinity purification and mass spectrometry.

Babu M, Krogan NJ, Awrey DE, Emili A, Greenblatt JF.

Methods Mol Biol. 2009;548:187-207. doi: 10.1007/978-1-59745-540-4_11.

PMID:
19521826
[PubMed - indexed for MEDLINE]
15.

Genetic basis of proteome variation in yeast.

Foss EJ, Radulovic D, Shaffer SA, Ruderfer DM, Bedalov A, Goodlett DR, Kruglyak L.

Nat Genet. 2007 Nov;39(11):1369-75. Epub 2007 Oct 21.

PMID:
17952072
[PubMed - indexed for MEDLINE]
16.

Subunit architecture of multimeric complexes isolated directly from cells.

Hernández H, Dziembowski A, Taverner T, Séraphin B, Robinson CV.

EMBO Rep. 2006 Jun;7(6):605-10. Epub 2006 May 19.

PMID:
16729021
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Global analysis of protein localization in budding yeast.

Huh WK, Falvo JV, Gerke LC, Carroll AS, Howson RW, Weissman JS, O'Shea EK.

Nature. 2003 Oct 16;425(6959):686-91.

PMID:
14562095
[PubMed - indexed for MEDLINE]
Free Article
18.

Affinity purification-mass spectrometry. Powerful tools for the characterization of protein complexes.

Bauer A, Kuster B.

Eur J Biochem. 2003 Feb;270(4):570-8. Review.

PMID:
12581197
[PubMed - indexed for MEDLINE]
Free Article
19.

Sequential peptide affinity purification system for the systematic isolation and identification of protein complexes from Escherichia coli.

Babu M, Butland G, Pogoutse O, Li J, Greenblatt JF, Emili A.

Methods Mol Biol. 2009;564:373-400. doi: 10.1007/978-1-60761-157-8_22.

PMID:
19544035
[PubMed - indexed for MEDLINE]
20.

Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast.

Graumann J, Dunipace LA, Seol JH, McDonald WH, Yates JR 3rd, Wold BJ, Deshaies RJ.

Mol Cell Proteomics. 2004 Mar;3(3):226-37. Epub 2003 Dec 5.

PMID:
14660704
[PubMed - indexed for MEDLINE]
Free Article

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