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Results: 1 to 20 of 127

1.

Novel small RNA-encoding genes in the intergenic regions of Escherichia coli.

Argaman L, Hershberg R, Vogel J, Bejerano G, Wagner EG, Margalit H, Altuvia S.

Curr Biol. 2001 Jun 26;11(12):941-50.

PMID:
11448770
[PubMed - indexed for MEDLINE]
Free Article
2.

Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis.

Saito S, Kakeshita H, Nakamura K.

Gene. 2009 Jan 1;428(1-2):2-8. doi: 10.1016/j.gene.2008.09.024. Epub 2008 Oct 2.

PMID:
18948176
[PubMed - indexed for MEDLINE]
3.

Identification of bacterial small non-coding RNAs: experimental approaches.

Altuvia S.

Curr Opin Microbiol. 2007 Jun;10(3):257-61. Epub 2007 Jun 5. Review.

PMID:
17553733
[PubMed - indexed for MEDLINE]
4.

Detection of 5'- and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coli.

Kawano M, Reynolds AA, Miranda-Rios J, Storz G.

Nucleic Acids Res. 2005 Feb 17;33(3):1040-50. Print 2005.

PMID:
15718303
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes.

Livny J, Fogel MA, Davis BM, Waldor MK.

Nucleic Acids Res. 2005 Jul 26;33(13):4096-105. Print 2005.

PMID:
16049021
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome-wide search reveals a novel GacA-regulated small RNA in Pseudomonas species.

González N, Heeb S, Valverde C, Kay E, Reimmann C, Junier T, Haas D.

BMC Genomics. 2008 Apr 13;9:167. doi: 10.1186/1471-2164-9-167.

PMID:
18405392
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Prediction of small, noncoding RNAs in bacteria using heterogeneous data.

Tjaden B.

J Math Biol. 2008 Jan;56(1-2):183-200. Epub 2007 Mar 13.

PMID:
17354017
[PubMed - indexed for MEDLINE]
8.

How to find small non-coding RNAs in bacteria.

Vogel J, Sharma CM.

Biol Chem. 2005 Dec;386(12):1219-38. Review.

PMID:
16336117
[PubMed - indexed for MEDLINE]
9.
10.

RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria.

Vogel J, Bartels V, Tang TH, Churakov G, Slagter-Jäger JG, Hüttenhofer A, Wagner EG.

Nucleic Acids Res. 2003 Nov 15;31(22):6435-43.

PMID:
14602901
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The Crp-activated small noncoding regulatory RNA CyaR (RyeE) links nutritional status to group behavior.

De Lay N, Gottesman S.

J Bacteriol. 2009 Jan;191(2):461-76. doi: 10.1128/JB.01157-08. Epub 2008 Oct 31.

PMID:
18978044
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A survey of small RNA-encoding genes in Escherichia coli.

Hershberg R, Altuvia S, Margalit H.

Nucleic Acids Res. 2003 Apr 1;31(7):1813-20.

PMID:
12654996
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence.

Padalon-Brauch G, Hershberg R, Elgrably-Weiss M, Baruch K, Rosenshine I, Margalit H, Altuvia S.

Nucleic Acids Res. 2008 Apr;36(6):1913-27. doi: 10.1093/nar/gkn050. Epub 2008 Feb 11.

PMID:
18267966
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A bioinformatics based approach to discover small RNA genes in the Escherichia coli genome.

Chen S, Lesnik EA, Hall TA, Sampath R, Griffey RH, Ecker DJ, Blyn LB.

Biosystems. 2002 Mar-May;65(2-3):157-77.

PMID:
12069726
[PubMed - indexed for MEDLINE]
15.

Prediction of non-coding and antisense RNA genes in Escherichia coli with Gapped Markov Model.

Yachie N, Numata K, Saito R, Kanai A, Tomita M.

Gene. 2006 May 10;372:171-81. Epub 2006 Mar 24.

PMID:
16564143
[PubMed - indexed for MEDLINE]
16.

Regulating bacterial transcription with small RNAs.

Storz G, Opdyke JA, Wassarman KM.

Cold Spring Harb Symp Quant Biol. 2006;71:269-73. Review.

PMID:
17381306
[PubMed - indexed for MEDLINE]
17.

An overview of RNAs with regulatory functions in gram-positive bacteria.

Romby P, Charpentier E.

Cell Mol Life Sci. 2010 Jan;67(2):217-37. doi: 10.1007/s00018-009-0162-8. Epub 2009 Oct 27. Review.

PMID:
19859665
[PubMed - indexed for MEDLINE]
18.
19.

Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011.

Valverde C, Livny J, Schlüter JP, Reinkensmeier J, Becker A, Parisi G.

BMC Genomics. 2008 Sep 16;9:416. doi: 10.1186/1471-2164-9-416.

PMID:
18793445
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Implication of CcpN in the regulation of a novel untranslated RNA (SR1) in Bacillus subtilis.

Licht A, Preis S, Brantl S.

Mol Microbiol. 2005 Oct;58(1):189-206.

PMID:
16164558
[PubMed - indexed for MEDLINE]

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