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Items: 1 to 20 of 158

1.

Large-scale human promoter mapping using CpG islands.

Ioshikhes IP, Zhang MQ.

Nat Genet. 2000 Sep;26(1):61-3.

PMID:
10973249
2.

CpGcluster: a distance-based algorithm for CpG-island detection.

Hackenberg M, Previti C, Luque-Escamilla PL, Carpena P, Martínez-Aroza J, Oliver JL.

BMC Bioinformatics. 2006 Oct 12;7:446.

3.

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters.

Saxonov S, Berg P, Brutlag DL.

Proc Natl Acad Sci U S A. 2006 Jan 31;103(5):1412-7. Epub 2006 Jan 23.

4.

CpG islands in vertebrate genomes.

Gardiner-Garden M, Frommer M.

J Mol Biol. 1987 Jul 20;196(2):261-82.

PMID:
3656447
5.

The properties of CpG islands in the putative promoter regions of human immunoglobulin (Ig) genes.

Liu GB, Yan H, Jiang YF, Chen R, Pettigrew JD, Zhao KN.

Gene. 2005 Sep 26;358:127-38.

PMID:
16112518
6.

PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.

Srivastava GP, Guo J, Shi H, Xu D.

Bioinformatics. 2008 Sep 1;24(17):1837-42. doi: 10.1093/bioinformatics/btn320. Epub 2008 Jun 25.

7.
8.

Promoter prediction analysis on the whole human genome.

Bajic VB, Tan SL, Suzuki Y, Sugano S.

Nat Biotechnol. 2004 Nov;22(11):1467-73.

PMID:
15529174
9.

A genome-wide screen for normally methylated human CpG islands that can identify novel imprinted genes.

Strichman-Almashanu LZ, Lee RS, Onyango PO, Perlman E, Flam F, Frieman MB, Feinberg AP.

Genome Res. 2002 Apr;12(4):543-54.

10.

Comprehensive analysis of CpG islands in human chromosomes 21 and 22.

Takai D, Jones PA.

Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3740-5. Epub 2002 Mar 12.

11.

CpG island mapping by epigenome prediction.

Bock C, Walter J, Paulsen M, Lengauer T.

PLoS Comput Biol. 2007 Jun;3(6):e110. Epub 2007 May 2.

12.

Predicting methylation status of CpG islands in the human brain.

Fang F, Fan S, Zhang X, Zhang MQ.

Bioinformatics. 2006 Sep 15;22(18):2204-9. Epub 2006 Jul 12.

13.

Susceptibility of nonpromoter CpG islands to de novo methylation in normal and neoplastic cells.

Nguyen C, Liang G, Nguyen TT, Tsao-Wei D, Groshen S, Lübbert M, Zhou JH, Benedict WF, Jones PA.

J Natl Cancer Inst. 2001 Oct 3;93(19):1465-72.

14.

Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping.

Bock C, Walter J, Paulsen M, Lengauer T.

Nucleic Acids Res. 2008 Jun;36(10):e55. doi: 10.1093/nar/gkn122. Epub 2008 Apr 15.

15.

An evaluation of new criteria for CpG islands in the human genome as gene markers.

Wang Y, Leung FC.

Bioinformatics. 2004 May 1;20(7):1170-7. Epub 2004 Feb 5.

16.

Genome-scale relationships between cytosine methylation and dinucleotide abundances in animals.

Simmen MW.

Genomics. 2008 Jul;92(1):33-40. doi: 10.1016/j.ygeno.2008.03.009. Epub 2008 May 15.

17.

CpG islands--'a rough guide'.

Illingworth RS, Bird AP.

FEBS Lett. 2009 Jun 5;583(11):1713-20. doi: 10.1016/j.febslet.2009.04.012. Epub 2009 Apr 18. Review.

18.

Monitoring methylation changes in cancer.

Beier V, Mund C, Hoheisel JD.

Adv Biochem Eng Biotechnol. 2007;104:1-11. Review.

PMID:
17290816
19.

A human B cell methylome at 100-base pair resolution.

Rauch TA, Wu X, Zhong X, Riggs AD, Pfeifer GP.

Proc Natl Acad Sci U S A. 2009 Jan 20;106(3):671-8. doi: 10.1073/pnas.0812399106. Epub 2009 Jan 12.

20.

Structure, function and evolution of CpG island promoters.

Antequera F.

Cell Mol Life Sci. 2003 Aug;60(8):1647-58. Review.

PMID:
14504655
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