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Similar articles for PubMed (Select 10508779)

1.
2.

Automated assignment of SCOP and CATH protein structure classifications from FSSP scores.

Getz G, Vendruscolo M, Sachs D, Domany E.

Proteins. 2002 Mar 1;46(4):405-15.

PMID:
11835515
3.

What are the baselines for protein fold recognition?

McGuffin LJ, Bryson K, Jones DT.

Bioinformatics. 2001 Jan;17(1):63-72.

4.

Systematic comparison of SCOP and CATH: a new gold standard for protein structure analysis.

Csaba G, Birzele F, Zimmer R.

BMC Struct Biol. 2009 Apr 17;9:23. doi: 10.1186/1472-6807-9-23.

5.

Automatic classification of protein structures using low-dimensional structure space mappings.

Asarnow D, Singh R.

BMC Bioinformatics. 2014;15 Suppl 2:S1. doi: 10.1186/1471-2105-15-S2-S1. Epub 2014 Jan 24.

6.

Towards an automatic classification of protein structural domains based on structural similarity.

Sam V, Tai CH, Garnier J, Gibrat JF, Lee B, Munson PJ.

BMC Bioinformatics. 2008 Jan 31;9:74. doi: 10.1186/1471-2105-9-74.

7.

Cross-over between discrete and continuous protein structure space: insights into automatic classification and networks of protein structures.

Pascual-GarcĂ­a A, Abia D, Ortiz AR, Bastolla U.

PLoS Comput Biol. 2009 Mar;5(3):e1000331. doi: 10.1371/journal.pcbi.1000331. Epub 2009 Mar 27.

8.

A comparison of SCOP and CATH with respect to domain-domain interactions.

Jefferson ER, Walsh TP, Barton GJ.

Proteins. 2008 Jan 1;70(1):54-62.

PMID:
17634986
9.

A fast SCOP fold classification system using content-based E-Predict algorithm.

Chi PH, Shyu CR, Xu D.

BMC Bioinformatics. 2006 Jul 26;7:362.

10.

F2CS: FSSP to CATH and SCOP prediction server.

Getz G, Starovolsky A, Domany E.

Bioinformatics. 2004 Sep 1;20(13):2150-2. Epub 2004 Apr 1.

11.

A consensus view of fold space: combining SCOP, CATH, and the Dali Domain Dictionary.

Day R, Beck DA, Armen RS, Daggett V.

Protein Sci. 2003 Oct;12(10):2150-60.

12.

The FSSP database of structurally aligned protein fold families.

Holm L, Sander C.

Nucleic Acids Res. 1994 Sep;22(17):3600-9.

13.

Touring protein fold space with Dali/FSSP.

Holm L, Sander C.

Nucleic Acids Res. 1998 Jan 1;26(1):316-9.

14.
15.

Classifying a protein in the CATH database of domain structures.

Orengo CA, Martin AM, Hutchinson G, Jones S, Jones DT, Michie AD, Swindells MB, Thornton JM.

Acta Crystallogr D Biol Crystallogr. 1998 Nov 1;54(Pt 6 Pt 1):1155-67.

PMID:
10089492
16.

SCOP: a structural classification of proteins database for the investigation of sequences and structures.

Murzin AG, Brenner SE, Hubbard T, Chothia C.

J Mol Biol. 1995 Apr 7;247(4):536-40.

PMID:
7723011
17.
18.

SCOP: a Structural Classification of Proteins database.

Hubbard TJ, Ailey B, Brenner SE, Murzin AG, Chothia C.

Nucleic Acids Res. 1999 Jan 1;27(1):254-6.

20.
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