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Results: 9

1.

Flexible backbone sampling methods to model and design protein alternative conformations.

Ollikainen N, Smith CA, Fraser JS, Kortemme T.

Methods Enzymol. 2013;523:61-85. doi: 10.1016/B978-0-12-394292-0.00004-7.

PMID:
23422426
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

C-terminal turn stability determines assembly differences between Aβ40 and Aβ42.

Roychaudhuri R, Yang M, Deshpande A, Cole GM, Frautschy S, Lomakin A, Benedek GB, Teplow DB.

J Mol Biol. 2013 Jan 23;425(2):292-308. doi: 10.1016/j.jmb.2012.11.006. Epub 2012 Nov 12.

PMID:
23154165
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Design of β-amyloid aggregation inhibitors from a predicted structural motif.

Novick PA, Lopes DH, Branson KM, Esteras-Chopo A, Graef IA, Bitan G, Pande VS.

J Med Chem. 2012 Apr 12;55(7):3002-10. doi: 10.1021/jm201332p. Epub 2012 Mar 15.

PMID:
22420626
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Rationally designed turn promoting mutation in the amyloid-β peptide sequence stabilizes oligomers in solution.

Rajadas J, Liu CW, Novick P, Kelley NW, Inayathullah M, Lemieux MC, Pande VS.

PLoS One. 2011;6(7):e21776. doi: 10.1371/journal.pone.0021776. Epub 2011 Jul 22.

PMID:
21799748
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Mapping the conformational dynamics and pathways of spontaneous steric zipper Peptide oligomerization.

Matthes D, Gapsys V, Daebel V, de Groot BL.

PLoS One. 2011 May 3;6(5):e19129. doi: 10.1371/journal.pone.0019129.

PMID:
21559277
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Probing the topological tolerance of multimeric protein interactions: evaluation of an estrogen/synthetic ligand for FK506 binding protein conjugate.

Moore TW, Gunther JR, Katzenellenbogen JA.

Bioconjug Chem. 2010 Oct 20;21(10):1880-9. doi: 10.1021/bc100266v.

PMID:
20919698
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Everything you wanted to know about Markov State Models but were afraid to ask.

Pande VS, Beauchamp K, Bowman GR.

Methods. 2010 Sep;52(1):99-105. doi: 10.1016/j.ymeth.2010.06.002. Epub 2010 Jun 4. Review.

PMID:
20570730
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Protein folded states are kinetic hubs.

Bowman GR, Pande VS.

Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10890-5. doi: 10.1073/pnas.1003962107. Epub 2010 Jun 1. Erratum in: Proc Natl Acad Sci U S A. 2010 Sep 21;107(38):16749.

PMID:
20534497
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Alzheimer's disease and blood-brain barrier function-Why have anti-beta-amyloid therapies failed to prevent dementia progression?

Pahnke J, Walker LC, Scheffler K, Krohn M.

Neurosci Biobehav Rev. 2009 Jul;33(7):1099-108. doi: 10.1016/j.neubiorev.2009.05.006. Epub 2009 May 27. Review.

PMID:
19481107
[PubMed - indexed for MEDLINE]
Free PMC Article

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