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Results: 1 to 20 of 64

1.

Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2(T), a cyanobacterium isolated from seawater of Chuuk lagoon.

Choi DH, Ryu JY, Kwon KK, Lee JH, Kim C, Lee CM, Noh JH.

Stand Genomic Sci. 2013 Oct 16;9(1):197-204. doi: 10.4056/sigs.4398180. eCollection 2013 Oct 16.

PMID:
24501656
[PubMed]
Free PMC Article
2.

A systematic search for discriminating sites in the 16S ribosomal RNA gene.

Vinje H, Almøy T, Liland KH, Snipen L.

Microb Inform Exp. 2014 Jan 27;4(1):2. doi: 10.1186/2042-5783-4-2.

PMID:
24467869
[PubMed]
Free PMC Article
3.

Polyphasic approach of bacterial classification - An overview of recent advances.

Prakash O, Verma M, Sharma P, Kumar M, Kumari K, Singh A, Kumari H, Jit S, Gupta SK, Khanna M, Lal R.

Indian J Microbiol. 2007 Jun;47(2):98-108. doi: 10.1007/s12088-007-0022-x. Epub 2007 Jul 8.

PMID:
23100651
[PubMed]
Free PMC Article
4.

Draft genome sequence of Arthrospira platensis C1 (PCC9438).

Cheevadhanarak S, Paithoonrangsarid K, Prommeenate P, Kaewngam W, Musigkain A, Tragoonrung S, Tabata S, Kaneko T, Chaijaruwanich J, Sangsrakru D, Tangphatsornruang S, Chanprasert J, Tongsima S, Kusonmano K, Jeamton W, Dulsawat S, Klanchui A, Vorapreeda T, Chumchua V, Khannapho C, Thammarongtham C, Plengvidhya V, Subudhi S, Hongsthong A, Ruengjitchatchawalya M, Meechai A, Senachak J, Tanticharoen M.

Stand Genomic Sci. 2012 Mar 19;6(1):43-53. doi: 10.4056/sigs.2525955. Epub 2012 Mar 5.

PMID:
22675597
[PubMed]
Free PMC Article
5.

A 'universal' type II chaperonin PCR detection system for the investigation of Archaea in complex microbial communities.

Chaban B, Hill JE.

ISME J. 2012 Feb;6(2):430-9. doi: 10.1038/ismej.2011.96. Epub 2011 Jul 21.

PMID:
21776031
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Complete genome sequence of Spirosoma linguale type strain (1).

Lail K, Sikorski J, Saunders E, Lapidus A, Glavina Del Rio T, Copeland A, Tice H, Cheng JF, Lucas S, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Brettin T, Detter JC, Schütze A, Rohde M, Tindall BJ, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Chen F.

Stand Genomic Sci. 2010 Mar 30;2(2):176-85. doi: 10.4056/sigs.741334.

PMID:
21304700
[PubMed]
Free PMC Article
7.

Complete genome sequence of Kangiella koreensis type strain (SW-125).

Han C, Sikorski J, Lapidus A, Nolan M, Glavina Del Rio T, Tice H, Cheng JF, Lucas S, Chen F, Copeland A, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Bruce D, Goodwin L, Pitluck S, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Saunders E, Brettin T, Göker M, Tindall BJ, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC.

Stand Genomic Sci. 2009 Nov 22;1(3):226-33. doi: 10.4056/sigs.36635.

PMID:
21304661
[PubMed]
Free PMC Article
8.

Complete genome sequence of Leptotrichia buccalis type strain (C-1013-b).

Ivanova N, Gronow S, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Bruce D, Goodwin L, Brettin T, Detter JC, Han C, Pitluck S, Mikhailova N, Pati A, Mavrommatis K, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Rohde C, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2009 Sep 24;1(2):126-32. doi: 10.4056/sigs.1854.

PMID:
21304648
[PubMed]
Free PMC Article
9.

Introducing W.A.T.E.R.S.: a workflow for the alignment, taxonomy, and ecology of ribosomal sequences.

Hartman AL, Riddle S, McPhillips T, Ludäscher B, Eisen JA.

BMC Bioinformatics. 2010 Jun 12;11:317. doi: 10.1186/1471-2105-11-317.

PMID:
20540779
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Double-blind characterization of non-genome-sequenced bacteria by mass spectrometry-based proteomics.

Jabbour RE, Deshpande SV, Wade MM, Stanford MF, Wick CH, Zulich AW, Skowronski EW, Snyder AP.

Appl Environ Microbiol. 2010 Jun;76(11):3637-44. doi: 10.1128/AEM.00055-10. Epub 2010 Apr 2.

PMID:
20363779
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Environmental proteomics: a paradigm shift in characterizing microbial activities at the molecular level.

Keller M, Hettich R.

Microbiol Mol Biol Rev. 2009 Mar;73(1):62-70. doi: 10.1128/MMBR.00028-08. Review.

PMID:
19258533
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Rooting the tree of life by transition analyses.

Cavalier-Smith T.

Biol Direct. 2006 Jul 11;1:19.

PMID:
16834776
[PubMed]
Free PMC Article
13.

Bacterial genotyping by 16S rRNA mass cataloging.

Jackson GW, McNichols RJ, Fox GE, Willson RC.

BMC Bioinformatics. 2006 Jun 23;7:321.

PMID:
16796754
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Microbial identification by mass cataloging.

Zhang Z, Jackson GW, Fox GE, Willson RC.

BMC Bioinformatics. 2006 Mar 8;7:117.

PMID:
16524471
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Selective Recovery of 16S rRNA Sequences from Natural Microbial Communities in the Form of cDNA.

Weller R, Ward DM.

Appl Environ Microbiol. 1989 Jul;55(7):1818-22.

PMID:
16347975
[PubMed]
Free PMC Article
16.

Use of chloroflexus-specific antiserum to evaluate filamentous bacteria of a hot spring microbial mat.

Tayne TA, Cutler JE, Ward DM.

Appl Environ Microbiol. 1987 Aug;53(8):1962-4.

PMID:
16347422
[PubMed]
Free PMC Article
17.

Micro-Mar: a database for dynamic representation of marine microbial biodiversity.

Pushker R, D'Auria G, Alba-Casado JC, Rodríguez-Valera F.

BMC Bioinformatics. 2005 Sep 9;6:222.

PMID:
16153293
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a single soil sample.

Rainey FA, Ray K, Ferreira M, Gatz BZ, Nobre MF, Bagaley D, Rash BA, Park MJ, Earl AM, Shank NC, Small AM, Henk MC, Battista JR, Kämpfer P, da Costa MS.

Appl Environ Microbiol. 2005 Sep;71(9):5225-35. Erratum in: Appl Environ Microbiol. 2005 Nov;71(11):7630.

PMID:
16151108
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Characteristics and living patterns of marine myxobacterial isolates.

Zhang YQ, Li YZ, Wang B, Wu ZH, Zhang CY, Gong X, Qiu ZJ, Zhang Y.

Appl Environ Microbiol. 2005 Jun;71(6):3331-6.

PMID:
15933036
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Poly(A) polymerase modification and reverse transcriptase PCR amplification of environmental RNA.

Botero LM, D'Imperio S, Burr M, McDermott TR, Young M, Hassett DJ.

Appl Environ Microbiol. 2005 Mar;71(3):1267-75.

PMID:
15746328
[PubMed - indexed for MEDLINE]
Free PMC Article

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