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Results: 1 to 20 of 90

1.

Seeing is believing: new methods for in situ single-cell transcriptomics.

Avital G, Hashimshony T, Yanai I.

Genome Biol. 2014 Mar 31;15(3):110. doi: 10.1186/gb4169.

PMID:
25000927
[PubMed - in process]
2.

Preparation of Single-Cell RNA-Seq Libraries for Next Generation Sequencing.

Trombetta JJ, Gennert D, Lu D, Satija R, Shalek AK, Regev A.

Curr Protoc Mol Biol. 2014 Jul 1;107:4.22.1-4.22.17. doi: 10.1002/0471142727.mb0422s107.

PMID:
24984854
[PubMed - in process]
3.

Methods, Challenges and Potentials of Single Cell RNA-seq.

Hebenstreit D.

Biology (Basel). 2012 Nov 16;1(3):658-67. doi: 10.3390/biology1030658.

PMID:
24832513
[PubMed]
Free PMC Article
4.

Transcriptomics in the RNA-seq era.

McGettigan PA.

Curr Opin Chem Biol. 2013 Feb;17(1):4-11. doi: 10.1016/j.cbpa.2012.12.008. Epub 2013 Jan 2. Review.

PMID:
23290152
[PubMed - indexed for MEDLINE]
5.

[RNA-Seq and its applications: a new technology for transcriptomics].

Qi YX, Liu YB, Rong WH.

Yi Chuan. 2011 Nov;33(11):1191-202. Review. Chinese.

PMID:
22120074
[PubMed - indexed for MEDLINE]
6.

mRNA-seq with agnostic splice site discovery for nervous system transcriptomics tested in chronic pain.

Hammer P, Banck MS, Amberg R, Wang C, Petznick G, Luo S, Khrebtukova I, Schroth GP, Beyerlein P, Beutler AS.

Genome Res. 2010 Jun;20(6):847-60. doi: 10.1101/gr.101204.109. Epub 2010 May 7.

PMID:
20452967
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Single-cell RNA-seq: advances and future challenges.

Saliba AE, Westermann AJ, Gorski SA, Vogel J.

Nucleic Acids Res. 2014 Oct 1;42(14):8845-60. doi: 10.1093/nar/gku555. Epub 2014 Jul 22.

PMID:
25053837
[PubMed - in process]
Free Article
8.

Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.

Ramsk├Âld D, Luo S, Wang YC, Li R, Deng Q, Faridani OR, Daniels GA, Khrebtukova I, Loring JF, Laurent LC, Schroth GP, Sandberg R.

Nat Biotechnol. 2012 Aug;30(8):777-82.

PMID:
22820318
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Feasibility of whole RNA sequencing from single-cell mRNA amplification.

Xu Y, Hu H, Zheng J, Li B.

Genet Res Int. 2013;2013:724124. doi: 10.1155/2013/724124. Epub 2013 Dec 23.

PMID:
24455282
[PubMed]
Free PMC Article
10.

Single read and paired end mRNA-Seq Illumina libraries from 10 nanograms total RNA.

Sengupta S, Bolin JM, Ruotti V, Nguyen BK, Thomson JA, Elwell AL, Stewart R.

J Vis Exp. 2011 Oct 27;(56):e3340. doi: 10.3791/3340.

PMID:
22064688
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq.

Yi H, Cho YJ, Won S, Lee JE, Jin Yu H, Kim S, Schroth GP, Luo S, Chun J.

Nucleic Acids Res. 2011 Nov 1;39(20):e140. doi: 10.1093/nar/gkr617. Epub 2011 Aug 31.

PMID:
21880599
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Technical variations in low-input RNA-seq methodologies.

Bhargava V, Head SR, Ordoukhanian P, Mercola M, Subramaniam S.

Sci Rep. 2014 Jan 14;4:3678. doi: 10.1038/srep03678.

PMID:
24419370
[PubMed - in process]
Free PMC Article
13.

Catalyzing plant science research with RNA-seq.

Martin LB, Fei Z, Giovannoni JJ, Rose JK.

Front Plant Sci. 2013 Apr 1;4:66. doi: 10.3389/fpls.2013.00066. eCollection 2013.

PMID:
23554602
[PubMed]
Free PMC Article
14.

Quantitative single-cell RNA-seq with unique molecular identifiers.

Islam S, Zeisel A, Joost S, La Manno G, Zajac P, Kasper M, L├Ânnerberg P, Linnarsson S.

Nat Methods. 2014 Feb;11(2):163-6. doi: 10.1038/nmeth.2772. Epub 2013 Dec 22.

PMID:
24363023
[PubMed - indexed for MEDLINE]
15.

Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.

Zhao W, He X, Hoadley KA, Parker JS, Hayes DN, Perou CM.

BMC Genomics. 2014 Jun 2;15:419. doi: 10.1186/1471-2164-15-419.

PMID:
24888378
[PubMed - in process]
Free PMC Article
16.

CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification.

Hashimshony T, Wagner F, Sher N, Yanai I.

Cell Rep. 2012 Sep 27;2(3):666-73. doi: 10.1016/j.celrep.2012.08.003. Epub 2012 Aug 30.

PMID:
22939981
[PubMed - indexed for MEDLINE]
Free Article
17.

Next generation sequencing of microbial transcriptomes: challenges and opportunities.

van Vliet AH.

FEMS Microbiol Lett. 2010 Jan;302(1):1-7. doi: 10.1111/j.1574-6968.2009.01767.x. Epub 2009 Aug 21. Review.

PMID:
19735299
[PubMed - indexed for MEDLINE]
18.

Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.

Jaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N, Paul F, Zaretsky I, Mildner A, Cohen N, Jung S, Tanay A, Amit I.

Science. 2014 Feb 14;343(6172):776-9. doi: 10.1126/science.1247651.

PMID:
24531970
[PubMed - indexed for MEDLINE]
19.

Exploring the shallow end; estimating information content in transcriptomics studies.

Kliebenstein DJ.

Front Plant Sci. 2012 Sep 10;3:213. doi: 10.3389/fpls.2012.00213. eCollection 2012.

PMID:
22973290
[PubMed]
Free PMC Article
20.

Designing a transcriptome next-generation sequencing project for a nonmodel plant species.

Strickler SR, Bombarely A, Mueller LA.

Am J Bot. 2012 Feb;99(2):257-66. doi: 10.3732/ajb.1100292. Epub 2012 Jan 19. Review.

PMID:
22268224
[PubMed - indexed for MEDLINE]
Free Article

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