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Results: 1 to 20 of 94

1.

Direct measurement of transcription rates reveals multiple mechanisms for configuration of the Arabidopsis ambient temperature response.

Sidaway-Lee K, Costa MJ, Rand DA, Finkenstadt B, Penfield S.

Genome Biol. 2014 Mar 3;15(3):R45. doi: 10.1186/gb-2014-15-3-r45.

PMID:
24580780
[PubMed - in process]
Free PMC Article
2.

Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana.

Narsai R, Howell KA, Millar AH, O'Toole N, Small I, Whelan J.

Plant Cell. 2007 Nov;19(11):3418-36. Epub 2007 Nov 16.

PMID:
18024567
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

mRNA degradation: an underestimated factor in steady-state transcript levels of cytochrome c oxidase subunits?

Bremer K, Moyes CD.

J Exp Biol. 2014 Jun 15;217(Pt 12):2212-20. doi: 10.1242/jeb.100214. Epub 2014 Apr 15.

PMID:
24737751
[PubMed - in process]
4.

Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses.

Chen W, Provart NJ, Glazebrook J, Katagiri F, Chang HS, Eulgem T, Mauch F, Luan S, Zou G, Whitham SA, Budworth PR, Tao Y, Xie Z, Chen X, Lam S, Kreps JA, Harper JF, Si-Ammour A, Mauch-Mani B, Heinlein M, Kobayashi K, Hohn T, Dangl JL, Wang X, Zhu T.

Plant Cell. 2002 Mar;14(3):559-74.

PMID:
11910004
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The RNA degradation pathway regulates the function of GAS5 a non-coding RNA in mammalian cells.

Tani H, Torimura M, Akimitsu N.

PLoS One. 2013;8(1):e55684. doi: 10.1371/journal.pone.0055684. Epub 2013 Jan 30.

PMID:
23383264
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Influence of mRNA decay rates on the computational prediction of transcription rate profiles from gene expression profiles.

Chin CF, Shih AC, Fan KC.

J Biosci. 2007 Dec;32(7):1251-62.

PMID:
18202449
[PubMed - indexed for MEDLINE]
Free Article
7.

H2A.Z-containing nucleosomes mediate the thermosensory response in Arabidopsis.

Kumar SV, Wigge PA.

Cell. 2010 Jan 8;140(1):136-47. doi: 10.1016/j.cell.2009.11.006.

PMID:
20079334
[PubMed - indexed for MEDLINE]
Free Article
8.

Alteration of [beta]-Tubulin Gene Expression during Low-Temperature Exposure in Leaves of Arabidopsis thaliana.

Chu B, Snustad DP, Carter JV.

Plant Physiol. 1993 Oct;103(2):371-377.

PMID:
12231943
[PubMed - as supplied by publisher]
Free PMC Article
9.

The microRNA156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE3 module regulates ambient temperature-responsive flowering via FLOWERING LOCUS T in Arabidopsis.

Kim JJ, Lee JH, Kim W, Jung HS, Huijser P, Ahn JH.

Plant Physiol. 2012 May;159(1):461-78. doi: 10.1104/pp.111.192369. Epub 2012 Mar 16.

PMID:
22427344
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Transcriptional and Post Transcriptional Control of Enterococcal Gene Regulation.

DebRoy S, Gao P, Garsin DA, Harvey BR, Kos V, Nes IF, Solheim M.

In: Gilmore MS, Clewell DB, Ike Y, Shankar N, editors. Enterococci: From Commensals to Leading Causes of Drug Resistant Infection [Internet]. Boston: Massachusetts Eye and Ear Infirmary; 2014-.
2014 Feb 12.

PMID:
24649509
[PubMed]
Books & Documents
11.

Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: rapid decay is associated with a group of touch- and specific clock-controlled genes.

Gutierrez RA, Ewing RM, Cherry JM, Green PJ.

Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11513-8. Epub 2002 Aug 7.

PMID:
12167669
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The Arabidopsis cold-responsive transcriptome and its regulation by ICE1.

Lee BH, Henderson DA, Zhu JK.

Plant Cell. 2005 Nov;17(11):3155-75. Epub 2005 Oct 7.

PMID:
16214899
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation.

Jiao Y, Riechmann JL, Meyerowitz EM.

Plant Cell. 2008 Oct;20(10):2571-85. doi: 10.1105/tpc.108.062786. Epub 2008 Oct 24.

PMID:
18952771
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Differential SAGE analysis in Arabidopsis uncovers increased transcriptome complexity in response to low temperature.

Robinson SJ, Parkin IA.

BMC Genomics. 2008 Sep 22;9:434. doi: 10.1186/1471-2164-9-434.

PMID:
18808718
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes.

Jiang Y, Deyholos MK.

BMC Plant Biol. 2006 Oct 12;6:25.

PMID:
17038189
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast.

Miller C, Schwalb B, Maier K, Schulz D, Dümcke S, Zacher B, Mayer A, Sydow J, Marcinowski L, Dölken L, Martin DE, Tresch A, Cramer P.

Mol Syst Biol. 2011 Jan 4;7:458. doi: 10.1038/msb.2010.112.

PMID:
21206491
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes.

James AB, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JW, Nimmo HG.

Plant Cell. 2012 Mar;24(3):961-81. doi: 10.1105/tpc.111.093948. Epub 2012 Mar 9.

PMID:
22408072
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter.

Barker BM, Kroll K, Vödisch M, Mazurie A, Kniemeyer O, Cramer RA.

BMC Genomics. 2012 Feb 6;13:62. doi: 10.1186/1471-2164-13-62.

PMID:
22309491
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Regulation of gonadotropin subunit gene transcription by gonadotropin-releasing hormone: measurement of primary transcript ribonucleic acids by quantitative reverse transcription-polymerase chain reaction assays.

Dalkin AC, Burger LL, Aylor KW, Haisenleder DJ, Workman LJ, Cho S, Marshall JC.

Endocrinology. 2001 Jan;142(1):139-46.

PMID:
11145576
[PubMed - indexed for MEDLINE]

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