Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 92

1.

AHT-ChIP-seq: a completely automated robotic protocol for high-throughput chromatin immunoprecipitation.

Aldridge S, Watt S, Quail MA, Rayner T, Lukk M, Bimson MF, Gaffney D, Odom DT.

Genome Biol. 2013 Nov 7;14(11):R124. doi: 10.1186/gb-2013-14-11-r124.

PMID:
24200198
[PubMed - in process]
Free PMC Article
2.

Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: identifying ChIP-quality p300 monoclonal antibodies.

Gasper WC, Marinov GK, Pauli-Behn F, Scott MT, Newberry K, DeSalvo G, Ou S, Myers RM, Vielmetter J, Wold BJ.

Sci Rep. 2014 Jun 12;4:5152. doi: 10.1038/srep05152.

PMID:
24919486
[PubMed - in process]
Free PMC Article
3.

Whole-genome chromatin profiling from limited numbers of cells using nano-ChIP-seq.

Adli M, Bernstein BE.

Nat Protoc. 2011 Sep 29;6(10):1656-68. doi: 10.1038/nprot.2011.402.

PMID:
21959244
[PubMed - indexed for MEDLINE]
4.

Limitations and possibilities of low cell number ChIP-seq.

Gilfillan GD, Hughes T, Sheng Y, Hjorthaug HS, Straub T, Gervin K, Harris JR, Undlien DE, Lyle R.

BMC Genomics. 2012 Nov 21;13:645. doi: 10.1186/1471-2164-13-645.

PMID:
23171294
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Analysis of in vivo transcription factor recruitment by chromatin immunoprecipitation of mouse embryonic kidney.

Heliot C, Cereghini S.

Methods Mol Biol. 2012;886:275-91. doi: 10.1007/978-1-61779-851-1_25.

PMID:
22639270
[PubMed - indexed for MEDLINE]
6.

ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions.

Schmidt D, Wilson MD, Spyrou C, Brown GD, Hadfield J, Odom DT.

Methods. 2009 Jul;48(3):240-8. doi: 10.1016/j.ymeth.2009.03.001. Epub 2009 Mar 9.

PMID:
19275939
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Characterising ChIP-seq binding patterns by model-based peak shape deconvolution.

Mendoza-Parra MA, Nowicka M, Van Gool W, Gronemeyer H.

BMC Genomics. 2013 Nov 26;14:834. doi: 10.1186/1471-2164-14-834.

PMID:
24279297
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Statistics of protein-DNA binding and the total number of binding sites for a transcription factor in the mammalian genome.

Kuznetsov VA, Singh O, Jenjaroenpun P.

BMC Genomics. 2010 Feb 10;11 Suppl 1:S12. doi: 10.1186/1471-2164-11-S1-S12.

PMID:
20158869
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Investigating physical chromatin associations across the Xenopus genome by chromatin immunoprecipitation.

Gentsch GE, Smith JC.

Cold Spring Harb Protoc. 2014 May 1;2014(5). pii: pdb.prot080614. doi: 10.1101/pdb.prot080614.

PMID:
24786504
[PubMed - in process]
10.

Quantitatively profiling genome-wide patterns of histone modifications in Arabidopsis thaliana using ChIP-seq.

Luo C, Lam E.

Methods Mol Biol. 2014;1112:177-93. doi: 10.1007/978-1-62703-773-0_12.

PMID:
24478015
[PubMed - in process]
11.

Using ChIP-seq technology to generate high-resolution profiles of histone modifications.

O'Geen H, Echipare L, Farnham PJ.

Methods Mol Biol. 2011;791:265-86. doi: 10.1007/978-1-61779-316-5_20.

PMID:
21913086
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data.

Jothi R, Cuddapah S, Barski A, Cui K, Zhao K.

Nucleic Acids Res. 2008 Sep;36(16):5221-31. doi: 10.1093/nar/gkn488. Epub 2008 Aug 6.

PMID:
18684996
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.

Han Z, Tian L, Pécot T, Huang T, Machiraju R, Huang K.

BMC Bioinformatics. 2012 Mar 13;13 Suppl 2:S2. doi: 10.1186/1471-2105-13-S2-S2.

PMID:
22536865
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq.

Hitchler MJ, Rice JC.

Methods Mol Biol. 2011;767:253-67. doi: 10.1007/978-1-61779-201-4_19.

PMID:
21822881
[PubMed - indexed for MEDLINE]
15.

Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.

Lefrançois P, Euskirchen GM, Auerbach RK, Rozowsky J, Gibson T, Yellman CM, Gerstein M, Snyder M.

BMC Genomics. 2009 Jan 21;10:37. doi: 10.1186/1471-2164-10-37.

PMID:
19159457
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states.

Blecher-Gonen R, Barnett-Itzhaki Z, Jaitin D, Amann-Zalcenstein D, Lara-Astiaso D, Amit I.

Nat Protoc. 2013 Mar;8(3):539-54. doi: 10.1038/nprot.2013.023. Epub 2013 Feb 21.

PMID:
23429716
[PubMed - indexed for MEDLINE]
17.

Statistical analysis of ChIP-seq data with MOSAiCS.

Sun G, Chung D, Liang K, Keleş S.

Methods Mol Biol. 2013;1038:193-212. doi: 10.1007/978-1-62703-514-9_12.

PMID:
23872977
[PubMed - indexed for MEDLINE]
18.

[Genomic analysis of DNA-protein interaction by chromatin immunoprecipitation].

Li ML, Wang W, Lu ZH.

Yi Chuan. 2010 Mar;32(3):219-28. Review. Chinese.

PMID:
20233698
[PubMed - indexed for MEDLINE]
19.

An improved ChIP-seq peak detection system for simultaneously identifying post-translational modified transcription factors by combinatorial fusion, using SUMOylation as an example.

Cheng CY, Chu CH, Hsu HW, Hsu FR, Tang CY, Wang WC, Kung HJ, Chang PC.

BMC Genomics. 2014;15 Suppl 1:S1. doi: 10.1186/1471-2164-15-S1-S1. Epub 2014 Jan 24.

PMID:
24564277
[PubMed - in process]
Free PMC Article
20.

Genome-wide profiling of DNA-binding proteins using barcode-based multiplex Solexa sequencing.

Raghav SK, Deplancke B.

Methods Mol Biol. 2012;786:247-62. doi: 10.1007/978-1-61779-292-2_15.

PMID:
21938631
[PubMed - indexed for MEDLINE]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk