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Results: 1 to 20 of 92

1.

The mutational landscape of chromatin regulatory factors across 4,623 tumor samples.

Gonzalez-Perez A, Jene-Sanz A, Lopez-Bigas N.

Genome Biol. 2013;14(9):r106.

PMID:
24063517
[PubMed - in process]
Free PMC Article
2.

The mutational landscape of phosphorylation signaling in cancer.

Reimand J, Wagih O, Bader GD.

Sci Rep. 2013 Oct 2;3:2651. doi: 10.1038/srep02651.

PMID:
24089029
[PubMed - in process]
Free PMC Article
3.

Comprehensive identification of mutational cancer driver genes across 12 tumor types.

Tamborero D, Gonzalez-Perez A, Perez-Llamas C, Deu-Pons J, Kandoth C, Reimand J, Lawrence MS, Getz G, Bader GD, Ding L, Lopez-Bigas N.

Sci Rep. 2013 Oct 2;3:2650. doi: 10.1038/srep02650.

PMID:
24084849
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Cancer core modules identification through genomic and transcriptomic changes correlation detection at network level.

Li W, Wang R, Bai L, Yan Z, Sun Z.

BMC Syst Biol. 2012 Jun 12;6:64. doi: 10.1186/1752-0509-6-64.

PMID:
22691569
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Clinical and pathologic impact of select chromatin-modulating tumor suppressors in clear cell renal cell carcinoma.

Hakimi AA, Chen YB, Wren J, Gonen M, Abdel-Wahab O, Heguy A, Liu H, Takeda S, Tickoo SK, Reuter VE, Voss MH, Motzer RJ, Coleman JA, Cheng EH, Russo P, Hsieh JJ.

Eur Urol. 2013 May;63(5):848-54. doi: 10.1016/j.eururo.2012.09.005. Epub 2012 Sep 27.

PMID:
23036577
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Mutations truncating the EP300 acetylase in human cancers.

Gayther SA, Batley SJ, Linger L, Bannister A, Thorpe K, Chin SF, Daigo Y, Russell P, Wilson A, Sowter HM, Delhanty JD, Ponder BA, Kouzarides T, Caldas C.

Nat Genet. 2000 Mar;24(3):300-3.

PMID:
10700188
[PubMed - indexed for MEDLINE]
7.

Identification of rare cancer driver mutations by network reconstruction.

Torkamani A, Schork NJ.

Genome Res. 2009 Sep;19(9):1570-8. doi: 10.1101/gr.092833.109. Epub 2009 Jul 2.

PMID:
19574499
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Identification of Sleeping Beauty transposon insertions in solid tumors using linker-mediated PCR.

Janik CL, Starr TK.

J Vis Exp. 2013 Feb 1;(72):e50156. doi: 10.3791/50156.

PMID:
23407503
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Mutational landscape and significance across 12 major cancer types.

Kandoth C, McLellan MD, Vandin F, Ye K, Niu B, Lu C, Xie M, Zhang Q, McMichael JF, Wyczalkowski MA, Leiserson MD, Miller CA, Welch JS, Walter MJ, Wendl MC, Ley TJ, Wilson RK, Raphael BJ, Ding L.

Nature. 2013 Oct 17;502(7471):333-9. doi: 10.1038/nature12634.

PMID:
24132290
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Expression and mutational analysis of the DCC, DPC4, and MADR2/JV18-1 genes in neuroblastoma.

Kong XT, Choi SH, Inoue A, Xu F, Chen T, Takita J, Yokota J, Bessho F, Yanagisawa M, Hanada R, Yamamoto K, Hayashi Y.

Cancer Res. 1997 Sep 1;57(17):3772-8.

PMID:
9288786
[PubMed - indexed for MEDLINE]
Free Article
11.

Domain landscapes of somatic mutations in cancer.

Nehrt NL, Peterson TA, Park D, Kann MG.

BMC Genomics. 2012 Jun 18;13 Suppl 4:S9. doi: 10.1186/1471-2164-13-S4-S9.

PMID:
22759657
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Integrated analysis of recurrent properties of cancer genes to identify novel drivers.

D'Antonio M, Ciccarelli FD.

Genome Biol. 2013 May 29;14(5):R52. doi: 10.1186/gb-2013-14-5-r52.

PMID:
23718799
[PubMed - in process]
Free PMC Article
13.

Novel candidate targets of beta-catenin/T-cell factor signaling identified by gene expression profiling of ovarian endometrioid adenocarcinomas.

Schwartz DR, Wu R, Kardia SL, Levin AM, Huang CC, Shedden KA, Kuick R, Misek DE, Hanash SM, Taylor JM, Reed H, Hendrix N, Zhai Y, Fearon ER, Cho KR.

Cancer Res. 2003 Jun 1;63(11):2913-22.

PMID:
12782598
[PubMed - indexed for MEDLINE]
Free Article
14.

Recurrent patterns of DNA methylation in the ZNF154, CASP8, and VHL promoters across a wide spectrum of human solid epithelial tumors and cancer cell lines.

Sánchez-Vega F, Gotea V, Petrykowska HM, Margolin G, Krivak TC, DeLoia JA, Bell DW, Elnitski L.

Epigenetics. 2013 Dec;8(12):1355-72. doi: 10.4161/epi.26701. Epub 2013 Oct 22.

PMID:
24149212
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genetic and epigenetic changes in fibrosis-associated hepatocarcinogenesis in mice.

Chappell G, Kutanzi K, Uehara T, Tryndyak V, Hong HH, Hoenerhoff M, Beland FA, Rusyn I, Pogribny IP.

Int J Cancer. 2014 Jun 15;134(12):2778-88. doi: 10.1002/ijc.28610. Epub 2013 Dec 14.

PMID:
24242335
[PubMed - indexed for MEDLINE]
16.

Oncogene mutation profiling of pediatric solid tumors reveals significant subsets of embryonal rhabdomyosarcoma and neuroblastoma with mutated genes in growth signaling pathways.

Shukla N, Ameur N, Yilmaz I, Nafa K, Lau CY, Marchetti A, Borsu L, Barr FG, Ladanyi M.

Clin Cancer Res. 2012 Feb 1;18(3):748-57. doi: 10.1158/1078-0432.CCR-11-2056. Epub 2011 Dec 5.

PMID:
22142829
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The landscape of candidate driver genes differs between male and female breast cancer.

Johansson I, Ringnér M, Hedenfalk I.

PLoS One. 2013 Oct 23;8(10):e78299. doi: 10.1371/journal.pone.0078299. eCollection 2013.

PMID:
24194916
[PubMed - in process]
Free PMC Article
18.

Combinatorial patterns of somatic gene mutations in cancer.

Yeang CH, McCormick F, Levine A.

FASEB J. 2008 Aug;22(8):2605-22. doi: 10.1096/fj.08-108985. Epub 2008 Apr 23. Review.

PMID:
18434431
[PubMed - indexed for MEDLINE]
Free Article
19.

Inferring causal genomic alterations in breast cancer using gene expression data.

Tran LM, Zhang B, Zhang Z, Zhang C, Xie T, Lamb JR, Dai H, Schadt EE, Zhu J.

BMC Syst Biol. 2011 Aug 1;5:121. doi: 10.1186/1752-0509-5-121.

PMID:
21806811
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Landscape of somatic mutations and clonal evolution in mantle cell lymphoma.

Beà S, Valdés-Mas R, Navarro A, Salaverria I, Martín-Garcia D, Jares P, Giné E, Pinyol M, Royo C, Nadeu F, Conde L, Juan M, Clot G, Vizán P, Di Croce L, Puente DA, López-Guerra M, Moros A, Roue G, Aymerich M, Villamor N, Colomo L, Martínez A, Valera A, Martín-Subero JI, Amador V, Hernández L, Rozman M, Enjuanes A, Forcada P, Muntañola A, Hartmann EM, Calasanz MJ, Rosenwald A, Ott G, Hernández-Rivas JM, Klapper W, Siebert R, Wiestner A, Wilson WH, Colomer D, López-Guillermo A, López-Otín C, Puente XS, Campo E.

Proc Natl Acad Sci U S A. 2013 Nov 5;110(45):18250-5. doi: 10.1073/pnas.1314608110. Epub 2013 Oct 21.

PMID:
24145436
[PubMed - indexed for MEDLINE]
Free PMC Article

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