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Results: 1 to 20 of 91

1.

Measuring cell-type specific differential methylation in human brain tissue.

Montaño CM, Irizarry RA, Kaufmann WE, Talbot K, Gur RE, Feinberg AP, Taub MA.

Genome Biol. 2013 Aug 30;14(8):R94. doi: 10.1186/gb-2013-14-8-r94.

PMID:
24000956
[PubMed - in process]
Free PMC Article
2.

Novel region discovery method for Infinium 450K DNA methylation data reveals changes associated with aging in muscle and neuronal pathways.

Ong ML, Holbrook JD.

Aging Cell. 2014 Feb;13(1):142-55. doi: 10.1111/acel.12159. Epub 2013 Oct 22.

PMID:
24112369
[PubMed - in process]
Free Article
3.

Adaptation of the CHARM DNA methylation platform for the rat genome reveals novel brain region-specific differences.

Lee RS, Tamashiro KL, Aryee MJ, Murakami P, Seifuddin F, Herb B, Huo Y, Rongione M, Feinberg AP, Moran TH, Potash JB.

Epigenetics. 2011 Nov;6(11):1378-90. doi: 10.4161/epi.6.11.18072. Epub 2011 Nov 1.

PMID:
22048247
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Accounting for cellular heterogeneity is critical in epigenome-wide association studies.

Jaffe AE, Irizarry RA.

Genome Biol. 2014 Feb 4;15(2):R31. doi: 10.1186/gb-2014-15-2-r31.

PMID:
24495553
[PubMed - in process]
Free PMC Article
5.

Evaluation of the Infinium Methylation 450K technology.

Dedeurwaerder S, Defrance M, Calonne E, Denis H, Sotiriou C, Fuks F.

Epigenomics. 2011 Dec;3(6):771-84. doi: 10.2217/epi.11.105.

PMID:
22126295
[PubMed - indexed for MEDLINE]
Free Article
6.

Sex-biased methylome and transcriptome in human prefrontal cortex.

Xu H, Wang F, Liu Y, Yu Y, Gelernter J, Zhang H.

Hum Mol Genet. 2014 Mar 1;23(5):1260-70. doi: 10.1093/hmg/ddt516. Epub 2013 Oct 24.

PMID:
24163133
[PubMed - in process]
7.

Identification of DNA methylation biomarkers from Infinium arrays.

Wessely F, Emes RD.

Front Genet. 2012 Aug 25;3:161. doi: 10.3389/fgene.2012.00161. eCollection 2012.

PMID:
22936948
[PubMed]
Free PMC Article
8.

Measuring the methylome in clinical samples: improved processing of the Infinium Human Methylation450 BeadChip Array.

Pan H, Chen L, Dogra S, Teh AL, Tan JH, Lim YI, Lim YC, Jin S, Lee YK, Ng PY, Ong ML, Barton S, Chong YS, Meaney MJ, Gluckman PD, Stunkel W, Ding C, Holbrook JD.

Epigenetics. 2012 Oct;7(10):1173-87. doi: 10.4161/epi.22102. Epub 2012 Sep 10.

PMID:
22964528
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A data-driven approach to preprocessing Illumina 450K methylation array data.

Pidsley R, Y Wong CC, Volta M, Lunnon K, Mill J, Schalkwyk LC.

BMC Genomics. 2013 May 1;14:293. doi: 10.1186/1471-2164-14-293.

PMID:
23631413
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

A composite framework for the statistical analysis of epidemiological DNA methylation data with the Infinium Human Methylation 450K BeadChip.

Valavanis I, Sifakis EG, Georgiadis P, Kyrtopoulos S, Chatziioannou AA.

IEEE J Biomed Health Inform. 2014 May;18(3):817-23. doi: 10.1109/JBHI.2014.2298351.

PMID:
24808224
[PubMed - in process]
11.

DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns.

Lokk K, Modhukur V, Rajashekar B, Märtens K, Mägi R, Kolde R, Koltšina M, Nilsson TK, Vilo J, Salumets A, Tõnisson N.

Genome Biol. 2014 Apr 1;15(4):r54. doi: 10.1186/gb-2014-15-4-r54.

PMID:
24690455
[PubMed - in process]
Free PMC Article
12.
13.

Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm.

Zhang B, Zhou Y, Lin N, Lowdon RF, Hong C, Nagarajan RP, Cheng JB, Li D, Stevens M, Lee HJ, Xing X, Zhou J, Sundaram V, Elliott G, Gu J, Shi T, Gascard P, Sigaroudinia M, Tlsty TD, Kadlecek T, Weiss A, O'Geen H, Farnham PJ, Maire CL, Ligon KL, Madden PA, Tam A, Moore R, Hirst M, Marra MA, Zhang B, Costello JF, Wang T.

Genome Res. 2013 Sep;23(9):1522-40. doi: 10.1101/gr.156539.113. Epub 2013 Jun 26.

PMID:
23804400
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Serotonin receptor of type 6 (5-HT6) in human prefrontal cortex and hippocampus post-mortem: an immunohistochemical and immunofluorescence study.

Marazziti D, Baroni S, Pirone A, Giannaccini G, Betti L, Testa G, Schmid L, Palego L, Borsini F, Bordi F, Piano I, Gargini C, Castagna M, Catena-Dell'osso M, Lucacchini A.

Neurochem Int. 2013 Jan;62(2):182-8. doi: 10.1016/j.neuint.2012.11.013. Epub 2012 Dec 3.

PMID:
23219521
[PubMed - indexed for MEDLINE]
15.

Genome-wide promoter methylome of small renal masses.

Ibragimova I, Slifker MJ, Maradeo ME, Banumathy G, Dulaimi E, Uzzo RG, Cairns P.

PLoS One. 2013 Oct 24;8(10):e77309. doi: 10.1371/journal.pone.0077309. eCollection 2013.

PMID:
24204800
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood.

Davies MN, Volta M, Pidsley R, Lunnon K, Dixit A, Lovestone S, Coarfa C, Harris RA, Milosavljevic A, Troakes C, Al-Sarraj S, Dobson R, Schalkwyk LC, Mill J.

Genome Biol. 2012 Jun 15;13(6):R43. doi: 10.1186/gb-2012-13-6-r43.

PMID:
22703893
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

DNA methylation shows genome-wide association of NFIX, RAPGEF2 and MSRB3 with gestational age at birth.

Lee H, Jaffe AE, Feinberg JI, Tryggvadottir R, Brown S, Montano C, Aryee MJ, Irizarry RA, Herbstman J, Witter FR, Goldman LR, Feinberg AP, Fallin MD.

Int J Epidemiol. 2012 Feb;41(1):188-99. doi: 10.1093/ije/dyr237.

PMID:
22422452
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Differential methylation of genes in the medial prefrontal cortex of developing and adult rats following exposure to maltreatment or nurturing care during infancy.

Blaze J, Scheuing L, Roth TL.

Dev Neurosci. 2013;35(4):306-16. doi: 10.1159/000350716. Epub 2013 Jun 8.

PMID:
23751776
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Infinium monkeys: Infinium 450K array for the Cynomolgus macaque (Macaca fascicularis).

Ong ML, Tan PY, MacIsaac JL, Mah SM, Buschdorf JP, Cheong CY, Stunkel W, Chan L, Gluckman PD, Chng K, Kobor MS, Meaney MJ, Holbrook JD.

G3 (Bethesda). 2014 May 8;4(7):1227-34. doi: 10.1534/g3.114.010967.

PMID:
24815017
[PubMed - in process]
Free Article
20.

A minimal set of tissue-specific hypomethylated CpGs constitute epigenetic signatures of developmental programming.

Colaneri A, Wang T, Pagadala V, Kittur J, Staffa NG Jr, Peddada SD, Isganaitis E, Patti ME, Birnbaumer L.

PLoS One. 2013 Sep 12;8(9):e72670. doi: 10.1371/journal.pone.0072670. eCollection 2013.

PMID:
24069155
[PubMed - indexed for MEDLINE]
Free PMC Article

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