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Results: 1 to 20 of 98

1.

Learning the language of post-transcriptional gene regulation.

Gerstberger S, Hafner M, Tuschl T.

Genome Biol. 2013 Aug 23;14(8):130. doi: 10.1186/gb-2013-14-8-130.

PMID:
23998708
[PubMed - in process]
Free PMC Article
2.

A compendium of RNA-binding motifs for decoding gene regulation.

Ray D, Kazan H, Cook KB, Weirauch MT, Najafabadi HS, Li X, Gueroussov S, Albu M, Zheng H, Yang A, Na H, Irimia M, Matzat LH, Dale RK, Smith SA, Yarosh CA, Kelly SM, Nabet B, Mecenas D, Li W, Laishram RS, Qiao M, Lipshitz HD, Piano F, Corbett AH, Carstens RP, Frey BJ, Anderson RA, Lynch KW, Penalva LO, Lei EP, Fraser AG, Blencowe BJ, Morris QD, Hughes TR.

Nature. 2013 Jul 11;499(7457):172-7. doi: 10.1038/nature12311.

PMID:
23846655
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

RNA-binding protein-mediated post-transcriptional controls of gene expression: integration of molecular mechanisms at the 3' end of mRNAs?

Vindry C, Vo Ngoc L, Kruys V, Gueydan C.

Biochem Pharmacol. 2014 Jun 15;89(4):431-40. doi: 10.1016/j.bcp.2014.04.003. Epub 2014 Apr 13.

PMID:
24735612
[PubMed - indexed for MEDLINE]
4.

Transcriptional and Post Transcriptional Control of Enterococcal Gene Regulation.

DebRoy S, Gao P, Garsin DA, Harvey BR, Kos V, Nes IF, Solheim M.

In: Gilmore MS, Clewell DB, Ike Y, Shankar N, editors. Enterococci: From Commensals to Leading Causes of Drug Resistant Infection [Internet]. Boston: Massachusetts Eye and Ear Infirmary; 2014-.
2014 Feb 12.

PMID:
24649509
[PubMed]
Books & Documents
5.

Genome-wide analysis of 3'-untranslated regions supports the existence of post-transcriptional regulons controlling gene expression in trypanosomes.

De Gaudenzi JG, Carmona SJ, Agüero F, Frasch AC.

PeerJ. 2013 Jul 30;1:e118. doi: 10.7717/peerj.118. Print 2013.

PMID:
23904995
[PubMed]
Free PMC Article
6.

The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression.

Maris C, Dominguez C, Allain FH.

FEBS J. 2005 May;272(9):2118-31. Review.

PMID:
15853797
[PubMed - indexed for MEDLINE]
Free Article
7.

Role of conserved cis-regulatory elements in the post-transcriptional regulation of the human MECP2 gene involved in autism.

Bagga JS, D'Antonio LA.

Hum Genomics. 2013 Sep 16;7:19. doi: 10.1186/1479-7364-7-19.

PMID:
24040966
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Global identification of conserved post-transcriptional regulatory programs in trypanosomatids.

Najafabadi HS, Lu Z, MacPherson C, Mehta V, Adoue V, Pastinen T, Salavati R.

Nucleic Acids Res. 2013 Oct;41(18):8591-600. doi: 10.1093/nar/gkt647. Epub 2013 Jul 22.

PMID:
23877242
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Patterns of sequence conservation in presynaptic neural genes.

Hadley D, Murphy T, Valladares O, Hannenhalli S, Ungar L, Kim J, Bućan M.

Genome Biol. 2006;7(11):R105.

PMID:
17096848
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Post-transcriptional gene regulation: from genome-wide studies to principles.

Halbeisen RE, Galgano A, Scherrer T, Gerber AP.

Cell Mol Life Sci. 2008 Mar;65(5):798-813. Review.

PMID:
18043867
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Known and novel post-transcriptional regulatory sequences are conserved across plant families.

Vaughn JN, Ellingson SR, Mignone F, Arnim Av.

RNA. 2012 Mar;18(3):368-84. doi: 10.1261/rna.031179.111. Epub 2012 Jan 11.

PMID:
22237150
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Identification of RNA recognition elements in the Saccharomyces cerevisiae transcriptome.

Riordan DP, Herschlag D, Brown PO.

Nucleic Acids Res. 2011 Mar;39(4):1501-9. doi: 10.1093/nar/gkq920. Epub 2010 Oct 18.

PMID:
20959291
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Hyper conserved elements in vertebrate mRNA 3'-UTRs reveal a translational network of RNA-binding proteins controlled by HuR.

Dassi E, Zuccotti P, Leo S, Provenzani A, Assfalg M, D'Onofrio M, Riva P, Quattrone A.

Nucleic Acids Res. 2013 Mar 1;41(5):3201-16. doi: 10.1093/nar/gkt017. Epub 2013 Feb 1.

PMID:
23376935
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants.

Silverman IM, Li F, Gregory BD.

Plant Sci. 2013 May;205-206:55-62. doi: 10.1016/j.plantsci.2013.01.009. Epub 2013 Feb 1. Review.

PMID:
23498863
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

New families of human regulatory RNA structures identified by comparative analysis of vertebrate genomes.

Parker BJ, Moltke I, Roth A, Washietl S, Wen J, Kellis M, Breaker R, Pedersen JS.

Genome Res. 2011 Nov;21(11):1929-43. doi: 10.1101/gr.112516.110. Epub 2011 Oct 12.

PMID:
21994249
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Circuitry of mRNA regulation.

Kanitz A, Gerber AP.

Wiley Interdiscip Rev Syst Biol Med. 2010 Mar-Apr;2(2):245-51. doi: 10.1002/wsbm.55. Review.

PMID:
20836026
[PubMed - indexed for MEDLINE]
17.

Informatic resources for identifying and annotating structural RNA motifs.

George AD, Tenenbaum SA.

Mol Biotechnol. 2009 Feb;41(2):180-93. doi: 10.1007/s12033-008-9114-z. Epub 2008 Nov 1. Review.

PMID:
18979204
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.

Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.

BMC Genomics. 2008 Oct 1;9:451. doi: 10.1186/1471-2164-9-451.

PMID:
18826656
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Regulatory element identification in subsets of transcripts: comparison and integration of current computational methods.

Fan D, Bitterman PB, Larsson O.

RNA. 2009 Aug;15(8):1469-82. doi: 10.1261/rna.1617009. Epub 2009 Jun 24.

PMID:
19553345
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Transcriptional control and the role of silencers in transcriptional regulation in eukaryotes.

Ogbourne S, Antalis TM.

Biochem J. 1998 Apr 1;331 ( Pt 1):1-14. Review.

PMID:
9512455
[PubMed - indexed for MEDLINE]
Free PMC Article

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