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Results: 1 to 20 of 94

1.

Variants in exons and in transcription factors affect gene expression in trans.

Kreimer A, Pe'er I.

Genome Biol. 2013 Jul 11;14(7):R71. doi: 10.1186/gb-2013-14-7-r71.

PMID:
23844908
[PubMed - in process]
Free PMC Article
2.

Co-regulated Transcripts Associated to Cooperating eSNPs Define Bi-fan Motifs in Human Gene Networks.

Kreimer A, Pe'er I.

PLoS Genet. 2014 Sep 11;10(9):e1004587. doi: 10.1371/journal.pgen.1004587. eCollection 2014 Sep.

PMID:
25210734
[PubMed - in process]
3.

Modularity of Escherichia coli sRNA regulation revealed by sRNA-target and protein network analysis.

Wu TH, Chang IY, Chu LC, Huang HC, Ng WV.

BMC Bioinformatics. 2010 Oct 15;11 Suppl 7:S11. doi: 10.1186/1471-2105-11-S7-S11.

PMID:
21106118
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Editorial: protein systems biology: method, regulation, and network.

Chen Q, Chen M.

Curr Protein Pept Sci. 2014;15(6):519-21.

PMID:
25135673
[PubMed - in process]
5.

Inter- and intra-combinatorial regulation by transcription factors and microRNAs.

Zhou Y, Ferguson J, Chang JT, Kluger Y.

BMC Genomics. 2007 Oct 30;8:396.

PMID:
17971223
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Studying alternative splicing regulatory networks through partial correlation analysis.

Chen L, Zheng S.

Genome Biol. 2009;10(1):R3. doi: 10.1186/gb-2009-10-1-r3. Epub 2009 Jan 9.

PMID:
19133160
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Comprehensive analysis of combinatorial regulation using the transcriptional regulatory network of yeast.

Balaji S, Babu MM, Iyer LM, Luscombe NM, Aravind L.

J Mol Biol. 2006 Jun 30;360(1):213-27. Epub 2006 May 3.

PMID:
16762362
[PubMed - indexed for MEDLINE]
8.

Genetic associations with expression for genes implicated in GWAS studies for atherosclerotic cardiovascular disease and blood phenotypes.

Zhang X, Johnson AD, Hendricks AE, Hwang SJ, Tanriverdi K, Ganesh SK, Smith NL, Peyser PA, Freedman JE, O'Donnell CJ.

Hum Mol Genet. 2014 Feb 1;23(3):782-95. doi: 10.1093/hmg/ddt461. Epub 2013 Sep 20.

PMID:
24057673
[PubMed - in process]
9.

Crosstalk between transcription factors and microRNAs in human protein interaction network.

Lin CC, Chen YJ, Chen CY, Oyang YJ, Juan HF, Huang HC.

BMC Syst Biol. 2012 Mar 13;6:18. doi: 10.1186/1752-0509-6-18.

PMID:
22413876
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Causal inference of regulator-target pairs by gene mapping of expression phenotypes.

Kulp DC, Jagalur M.

BMC Genomics. 2006 May 24;7:125.

PMID:
16719927
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Transcriptional regulation and spatial interactions of head-to-head genes.

Chen Y, Li Y, Wei J, Li YY.

BMC Genomics. 2014 Jun 24;15:519. doi: 10.1186/1471-2164-15-519.

PMID:
24962804
[PubMed - in process]
Free PMC Article
12.

Discovering functional interaction patterns in protein-protein interaction networks.

Turanalp ME, Can T.

BMC Bioinformatics. 2008 Jun 11;9:276. doi: 10.1186/1471-2105-9-276.

PMID:
18547430
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis.

Jin H, Vacic V, Girke T, Lonardi S, Zhu JK.

BMC Mol Biol. 2008 Jan 14;9:6. doi: 10.1186/1471-2199-9-6.

PMID:
18194570
[PubMed - indexed for MEDLINE]
Free PMC Article
14.
15.

Genomic analysis of gene expression relationships in transcriptional regulatory networks.

Yu H, Luscombe NM, Qian J, Gerstein M.

Trends Genet. 2003 Aug;19(8):422-7.

PMID:
12902159
[PubMed - indexed for MEDLINE]
16.

Genetic contribution to variable human CYP3A-mediated metabolism.

Lamba JK, Lin YS, Schuetz EG, Thummel KE.

Adv Drug Deliv Rev. 2002 Nov 18;54(10):1271-94. Review.

PMID:
12406645
[PubMed - indexed for MEDLINE]
17.

Gene, pathway and network frameworks to identify epistatic interactions of single nucleotide polymorphisms derived from GWAS data.

Liu Y, Maxwell S, Feng T, Zhu X, Elston RC, Koyut├╝rk M, Chance MR.

BMC Syst Biol. 2012;6 Suppl 3:S15. doi: 10.1186/1752-0509-6-S3-S15. Epub 2012 Dec 17.

PMID:
23281810
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Cis and trans effects of human genomic variants on gene expression.

Bryois J, Buil A, Evans DM, Kemp JP, Montgomery SB, Conrad DF, Ho KM, Ring S, Hurles M, Deloukas P, Davey Smith G, Dermitzakis ET.

PLoS Genet. 2014 Jul 10;10(7):e1004461. doi: 10.1371/journal.pgen.1004461. eCollection 2014 Jul.

PMID:
25010687
[PubMed - in process]
Free PMC Article
19.

Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).

Foffi G, Pastore A, Piazza F, Temussi PA.

Phys Biol. 2013 Aug 2;10(4):040301. [Epub ahead of print]

PMID:
23912807
[PubMed - as supplied by publisher]
20.

Genomic features defining exonic variants that modulate splicing.

Woolfe A, Mullikin JC, Elnitski L.

Genome Biol. 2010;11(2):R20. doi: 10.1186/gb-2010-11-2-r20. Epub 2010 Feb 16.

PMID:
20158892
[PubMed - indexed for MEDLINE]
Free PMC Article

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