Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 97

1.

Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling.

Clarke M, Lohan AJ, Liu B, Lagkouvardos I, Roy S, Zafar N, Bertelli C, Schilde C, Kianianmomeni A, Bürglin TR, Frech C, Turcotte B, Kopec KO, Synnott JM, Choo C, Paponov I, Finkler A, Heng Tan CS, Hutchins AP, Weinmeier T, Rattei T, Chu JS, Gimenez G, Irimia M, Rigden DJ, Fitzpatrick DA, Lorenzo-Morales J, Bateman A, Chiu CH, Tang P, Hegemann P, Fromm H, Raoult D, Greub G, Miranda-Saavedra D, Chen N, Nash P, Ginger ML, Horn M, Schaap P, Caler L, Loftus BJ.

Genome Biol. 2013 Feb 1;14(2):R11. doi: 10.1186/gb-2013-14-2-r11.

PMID:
23375108
[PubMed - in process]
Free PMC Article
2.

Sampling gene diversity across the supergroup Amoebozoa: large EST data sets from Acanthamoeba castellanii, Hartmannella vermiformis, Physarum polycephalum, Hyperamoeba dachnaya and Hyperamoeba sp.

Watkins RF, Gray MW.

Protist. 2008 Apr;159(2):269-81. doi: 10.1016/j.protis.2007.12.001. Epub 2008 Feb 13.

PMID:
18276190
[PubMed - indexed for MEDLINE]
3.

The frequency of eubacterium-to-eukaryote lateral gene transfers shows significant cross-taxa variation within amoebozoa.

Watkins RF, Gray MW.

J Mol Evol. 2006 Dec;63(6):801-14. Epub 2006 Nov 2.

PMID:
17086451
[PubMed - indexed for MEDLINE]
4.

Compositional complexity of the mitochondrial proteome of a unicellular eukaryote (Acanthamoeba castellanii, supergroup Amoebozoa) rivals that of animals, fungi, and plants.

Gawryluk RM, Chisholm KA, Pinto DM, Gray MW.

J Proteomics. 2014 Jul 12;109C:400-416. doi: 10.1016/j.jprot.2014.07.005. [Epub ahead of print]

PMID:
25026440
[PubMed - as supplied by publisher]
5.

Editorial: protein systems biology: method, regulation, and network.

Chen Q, Chen M.

Curr Protein Pept Sci. 2014;15(6):519-21.

PMID:
25135673
[PubMed - in process]
6.

Contribution of lateral gene transfers to the genome composition and parasitic ability of root-knot nematodes.

Paganini J, Campan-Fournier A, Da Rocha M, Gouret P, Pontarotti P, Wajnberg E, Abad P, Danchin EG.

PLoS One. 2012;7(11):e50875. doi: 10.1371/journal.pone.0050875. Epub 2012 Nov 30.

PMID:
23226415
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Phylogenomic study indicates widespread lateral gene transfer in Entamoeba and suggests a past intimate relationship with parabasalids.

Grant JR, Katz LA.

Genome Biol Evol. 2014 Aug 21. pii: evu179. [Epub ahead of print]

PMID:
25146649
[PubMed - as supplied by publisher]
Free Article
8.

Genome analysis of a simultaneously predatory and prey-independent, novel Bdellovibrio bacteriovorus from the River Tiber, supports in silico predictions of both ancient and recent lateral gene transfer from diverse bacteria.

Hobley L, Lerner TR, Williams LE, Lambert C, Till R, Milner DS, Basford SM, Capeness MJ, Fenton AK, Atterbury RJ, Harris MA, Sockett RE.

BMC Genomics. 2012 Nov 27;13:670. doi: 10.1186/1471-2164-13-670.

PMID:
23181807
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The mitochondrial DNA of the amoeboid protozoon, Acanthamoeba castellanii: complete sequence, gene content and genome organization.

Burger G, Plante I, Lonergan KM, Gray MW.

J Mol Biol. 1995 Feb 3;245(5):522-37.

PMID:
7844823
[PubMed - indexed for MEDLINE]
10.

Genomic and systems evolution in Vibrionaceae species.

Gu J, Neary J, Cai H, Moshfeghian A, Rodriguez SA, Lilburn TG, Wang Y.

BMC Genomics. 2009 Jul 7;10 Suppl 1:S11. doi: 10.1186/1471-2164-10-S1-S11.

PMID:
19594870
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A phylogenomic investigation into the origin of metazoa.

Ruiz-Trillo I, Roger AJ, Burger G, Gray MW, Lang BF.

Mol Biol Evol. 2008 Apr;25(4):664-72. doi: 10.1093/molbev/msn006. Epub 2008 Jan 9.

PMID:
18184723
[PubMed - indexed for MEDLINE]
Free Article
12.

Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes.

Andersson JO, Hirt RP, Foster PG, Roger AJ.

BMC Evol Biol. 2006 Mar 21;6:27.

PMID:
16551352
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Evolutionary genomics of nucleo-cytoplasmic large DNA viruses.

Iyer LM, Balaji S, Koonin EV, Aravind L.

Virus Res. 2006 Apr;117(1):156-84. Epub 2006 Feb 21. Review.

PMID:
16494962
[PubMed - indexed for MEDLINE]
14.

Evolution of glutamate dehydrogenase genes: evidence for lateral gene transfer within and between prokaryotes and eukaryotes.

Andersson JO, Roger AJ.

BMC Evol Biol. 2003 Jun 23;3:14. Epub 2003 Jun 23.

PMID:
12820901
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes.

Andersson JO, Sjögren AM, Davis LA, Embley TM, Roger AJ.

Curr Biol. 2003 Jan 21;13(2):94-104.

PMID:
12546782
[PubMed - indexed for MEDLINE]
Free Article
16.

Networks of gene sharing among 329 proteobacterial genomes reveal differences in lateral gene transfer frequency at different phylogenetic depths.

Kloesges T, Popa O, Martin W, Dagan T.

Mol Biol Evol. 2011 Feb;28(2):1057-74. doi: 10.1093/molbev/msq297. Epub 2010 Nov 8.

PMID:
21059789
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Within-species lateral genetic transfer and the evolution of transcriptional regulation in Escherichia coli and Shigella.

Skippington E, Ragan MA.

BMC Genomics. 2011 Oct 29;12:532. doi: 10.1186/1471-2164-12-532.

PMID:
22035052
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Amoebozoa possess lineage-specific globin gene repertoires gained by individual horizontal gene transfers.

Dröge J, Buczek D, Suzuki Y, Makałowski W.

Int J Biol Sci. 2014 Jun 19;10(7):689-701. doi: 10.7150/ijbs.8327. eCollection 2014.

PMID:
25013378
[PubMed - in process]
Free PMC Article
19.

Comparative genomics in the Amoebozoa clade.

Glöckner G, Noegel AA.

Biol Rev Camb Philos Soc. 2013 Feb;88(1):215-25. doi: 10.1111/j.1469-185X.2012.00248.x. Epub 2012 Nov 8. Review.

PMID:
23134060
[PubMed - indexed for MEDLINE]
20.

Evolution of the MAGUK protein gene family in premetazoan lineages.

de Mendoza A, Suga H, Ruiz-Trillo I.

BMC Evol Biol. 2010 Apr 1;10:93. doi: 10.1186/1471-2148-10-93.

PMID:
20359327
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk