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Results: 1 to 20 of 98

1.

Evidence for conserved post-transcriptional roles of unitary pseudogenes and for frequent bifunctionality of mRNAs.

Marques AC, Tan J, Lee S, Kong L, Heger A, Ponting CP.

Genome Biol. 2012 Nov 15;13(11):R102. doi: 10.1186/gb-2012-13-11-r102.

PMID:
23153069
[PubMed - in process]
Free PMC Article
2.

Assessing the genomic evidence for conserved transcribed pseudogenes under selection.

Khachane AN, Harrison PM.

BMC Genomics. 2009 Sep 15;10:435. doi: 10.1186/1471-2164-10-435.

PMID:
19754956
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Rapid turnover of long noncoding RNAs and the evolution of gene expression.

Kutter C, Watt S, Stefflova K, Wilson MD, Goncalves A, Ponting CP, Odom DT, Marques AC.

PLoS Genet. 2012;8(7):e1002841. doi: 10.1371/journal.pgen.1002841. Epub 2012 Jul 26.

PMID:
22844254
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A coding-independent function of gene and pseudogene mRNAs regulates tumour biology.

Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP.

Nature. 2010 Jun 24;465(7301):1033-8. doi: 10.1038/nature09144.

PMID:
20577206
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability.

Harrison PM, Zheng D, Zhang Z, Carriero N, Gerstein M.

Nucleic Acids Res. 2005 Apr 28;33(8):2374-83. Print 2005.

PMID:
15860774
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer.

Tahira AC, Kubrusly MS, Faria MF, Dazzani B, Fonseca RS, Maracaja-Coutinho V, Verjovski-Almeida S, Machado MC, Reis EM.

Mol Cancer. 2011 Nov 13;10:141. doi: 10.1186/1476-4598-10-141.

PMID:
22078386
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The multilayered complexity of ceRNA crosstalk and competition.

Tay Y, Rinn J, Pandolfi PP.

Nature. 2014 Jan 16;505(7483):344-52. doi: 10.1038/nature12986. Review.

PMID:
24429633
[PubMed - indexed for MEDLINE]
Free PMC Article
8.
9.

Genome-wide survey for biologically functional pseudogenes.

Svensson O, Arvestad L, Lagergren J.

PLoS Comput Biol. 2006 May;2(5):e46. Epub 2006 May 5.

PMID:
16680195
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes.

Sakai H, Koyanagi KO, Imanishi T, Itoh T, Gojobori T.

Gene. 2007 Mar 15;389(2):196-203. Epub 2006 Nov 18.

PMID:
17196768
[PubMed - indexed for MEDLINE]
11.

Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs.

Jalali S, Jayaraj GG, Scaria V.

Biol Direct. 2012 Aug 7;7:25. doi: 10.1186/1745-6150-7-25.

PMID:
22871084
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes.

Chodroff RA, Goodstadt L, Sirey TM, Oliver PL, Davies KE, Green ED, Molnár Z, Ponting CP.

Genome Biol. 2010;11(7):R72. doi: 10.1186/gb-2010-11-7-r72. Epub 2010 Jul 12.

PMID:
20624288
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes.

Watanabe T, Totoki Y, Toyoda A, Kaneda M, Kuramochi-Miyagawa S, Obata Y, Chiba H, Kohara Y, Kono T, Nakano T, Surani MA, Sakaki Y, Sasaki H.

Nature. 2008 May 22;453(7194):539-43. doi: 10.1038/nature06908. Epub 2008 Apr 10.

PMID:
18404146
[PubMed - indexed for MEDLINE]
14.

Pseudogenes: pseudo-functional or key regulators in health and disease?

Pink RC, Wicks K, Caley DP, Punch EK, Jacobs L, Carter DR.

RNA. 2011 May;17(5):792-8. doi: 10.1261/rna.2658311. Epub 2011 Mar 11. Review.

PMID:
21398401
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Retropseudogenes derived from the human Ro/SS-A autoantigen-associated hY RNAs.

Perreault J, Noël JF, Brière F, Cousineau B, Lucier JF, Perreault JP, Boire G.

Nucleic Acids Res. 2005 Apr 7;33(6):2032-41. Print 2005.

PMID:
15817567
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The complex transcriptional landscape of the anucleate human platelet.

Bray PF, McKenzie SE, Edelstein LC, Nagalla S, Delgrosso K, Ertel A, Kupper J, Jing Y, Londin E, Loher P, Chen HW, Fortina P, Rigoutsos I.

BMC Genomics. 2013 Jan 16;14:1. doi: 10.1186/1471-2164-14-1.

PMID:
23323973
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA.

Hendrickson DG, Hogan DJ, McCullough HL, Myers JW, Herschlag D, Ferrell JE, Brown PO.

PLoS Biol. 2009 Nov;7(11):e1000238. doi: 10.1371/journal.pbio.1000238. Epub 2009 Nov 10.

PMID:
19901979
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Pseudogenes: pseudo or real functional elements?

Li W, Yang W, Wang XJ.

J Genet Genomics. 2013 Apr 20;40(4):171-7. doi: 10.1016/j.jgg.2013.03.003. Epub 2013 Mar 14. Review.

PMID:
23618400
[PubMed - indexed for MEDLINE]
19.

Transcriptional and Post Transcriptional Control of Enterococcal Gene Regulation.

DebRoy S, Gao P, Garsin DA, Harvey BR, Kos V, Nes IF, Solheim M.

In: Gilmore MS, Clewell DB, Ike Y, Shankar N, editors. Enterococci: From Commensals to Leading Causes of Drug Resistant Infection [Internet]. Boston: Massachusetts Eye and Ear Infirmary; 2014-.
2014 Feb 12.

PMID:
24649509
[PubMed]
Books & Documents
20.

Implications of high level pseudogene transcription in Mycobacterium leprae.

Williams DL, Slayden RA, Amin A, Martinez AN, Pittman TL, Mira A, Mitra A, Nagaraja V, Morrison NE, Moraes M, Gillis TP.

BMC Genomics. 2009 Aug 25;10:397. doi: 10.1186/1471-2164-10-397.

PMID:
19706172
[PubMed - indexed for MEDLINE]
Free PMC Article

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