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Results: 1 to 20 of 102

1.

Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome.

Thomson JP, Lempiäinen H, Hackett JA, Nestor CE, Müller A, Bolognani F, Oakeley EJ, Schübeler D, Terranova R, Reinhardt D, Moggs JG, Meehan RR.

Genome Biol. 2012 Oct 3;13(10):R93. doi: 10.1186/gb-2012-13-10-r93.

PMID:
23034186
[PubMed - in process]
Free PMC Article
2.

Dynamic changes in 5-hydroxymethylation signatures underpin early and late events in drug exposed liver.

Thomson JP, Hunter JM, Lempiäinen H, Müller A, Terranova R, Moggs JG, Meehan RR.

Nucleic Acids Res. 2013 Jun;41(11):5639-54. doi: 10.1093/nar/gkt232. Epub 2013 Apr 17.

PMID:
23598998
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Diversity of two forms of DNA methylation in the brain.

Chen Y, Damayanti NP, Irudayaraj J, Dunn K, Zhou FC.

Front Genet. 2014 Mar 10;5:46. doi: 10.3389/fgene.2014.00046. eCollection 2014.

PMID:
24653733
[PubMed]
Free PMC Article
4.

Epigenetic profiles as defined signatures of xenobiotic exposure.

Thomson JP, Moggs JG, Wolf CR, Meehan RR.

Mutat Res Genet Toxicol Environ Mutagen. 2014 Apr;764-765:3-9. doi: 10.1016/j.mrgentox.2013.08.007. Epub 2013 Aug 31. Review.

PMID:
24001620
[PubMed - indexed for MEDLINE]
5.

Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during germ cell reprogramming.

Yamaguchi S, Hong K, Liu R, Inoue A, Shen L, Zhang K, Zhang Y.

Cell Res. 2013 Mar;23(3):329-39. doi: 10.1038/cr.2013.22. Epub 2013 Feb 12.

PMID:
23399596
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genomic mapping of 5-hydroxymethylcytosine in the human brain.

Jin SG, Wu X, Li AX, Pfeifer GP.

Nucleic Acids Res. 2011 Jul;39(12):5015-24. doi: 10.1093/nar/gkr120. Epub 2011 Mar 4.

PMID:
21378125
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Dynamics of 5-hydroxymethylcytosine and chromatin marks in Mammalian neurogenesis.

Hahn MA, Qiu R, Wu X, Li AX, Zhang H, Wang J, Jui J, Jin SG, Jiang Y, Pfeifer GP, Lu Q.

Cell Rep. 2013 Feb 21;3(2):291-300. doi: 10.1016/j.celrep.2013.01.011. Epub 2013 Feb 9.

PMID:
23403289
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Base-resolution maps of 5-methylcytosine and 5-hydroxymethylcytosine in Dahl S rats: effect of salt and genomic sequence.

Liu Y, Liu P, Yang C, Cowley AW Jr, Liang M.

Hypertension. 2014 Apr;63(4):827-38. doi: 10.1161/HYPERTENSIONAHA.113.02637. Epub 2014 Jan 13.

PMID:
24420542
[PubMed - indexed for MEDLINE]
9.

Replacement of Oct4 by Tet1 during iPSC induction reveals an important role of DNA methylation and hydroxymethylation in reprogramming.

Gao Y, Chen J, Li K, Wu T, Huang B, Liu W, Kou X, Zhang Y, Huang H, Jiang Y, Yao C, Liu X, Lu Z, Xu Z, Kang L, Chen J, Wang H, Cai T, Gao S.

Cell Stem Cell. 2013 Apr 4;12(4):453-69. doi: 10.1016/j.stem.2013.02.005. Epub 2013 Mar 14.

PMID:
23499384
[PubMed - indexed for MEDLINE]
Free Article
10.

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine.

Iqbal K, Jin SG, Pfeifer GP, Szabó PE.

Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3642-7. doi: 10.1073/pnas.1014033108. Epub 2011 Feb 14.

PMID:
21321204
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Phenobarbital mediates an epigenetic switch at the constitutive androstane receptor (CAR) target gene Cyp2b10 in the liver of B6C3F1 mice.

Lempiäinen H, Müller A, Brasa S, Teo SS, Roloff TC, Morawiec L, Zamurovic N, Vicart A, Funhoff E, Couttet P, Schübeler D, Grenet O, Marlowe J, Moggs J, Terranova R.

PLoS One. 2011 Mar 24;6(3):e18216. doi: 10.1371/journal.pone.0018216.

PMID:
21455306
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

5-Hydroxymethylcytosine: A stable or transient DNA modification?

Hahn MA, Szabó PE, Pfeifer GP.

Genomics. 2014 Aug 30. pii: S0888-7543(14)00157-8. doi: 10.1016/j.ygeno.2014.08.015. [Epub ahead of print]

PMID:
25181633
[PubMed - as supplied by publisher]
13.

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation.

Ficz G, Branco MR, Seisenberger S, Santos F, Krueger F, Hore TA, Marques CJ, Andrews S, Reik W.

Nature. 2011 May 19;473(7347):398-402. doi: 10.1038/nature10008. Epub 2011 Apr 3.

PMID:
21460836
[PubMed - indexed for MEDLINE]
14.

Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells.

Neri F, Incarnato D, Krepelova A, Rapelli S, Pagnani A, Zecchina R, Parlato C, Oliviero S.

Genome Biol. 2013 Aug 29;14(8):R91. doi: 10.1186/gb-2013-14-8-r91.

PMID:
23987249
[PubMed - in process]
Free PMC Article
15.

Increased 5-hydroxymethylcytosine and decreased 5-methylcytosine are indicators of global epigenetic dysregulation in diffuse intrinsic pontine glioma.

Ahsan S, Raabe EH, Haffner MC, Vaghasia A, Warren KE, Quezado M, Ballester LY, Nazarian J, Eberhart CG, Rodriguez FJ.

Acta Neuropathol Commun. 2014 Jun 3;2:59. doi: 10.1186/2051-5960-2-59.

PMID:
24894482
[PubMed - in process]
Free Article
16.

A global increase in 5-hydroxymethylcytosine levels marks osteoarthritic chondrocytes.

Taylor SE, Smeriglio P, Dhulipala L, Rath M, Bhutani N.

Arthritis Rheumatol. 2014 Jan;66(1):90-100. doi: 10.1002/art.38200.

PMID:
24449578
[PubMed - indexed for MEDLINE]
17.

Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2.

Doege CA, Inoue K, Yamashita T, Rhee DB, Travis S, Fujita R, Guarnieri P, Bhagat G, Vanti WB, Shih A, Levine RL, Nik S, Chen EI, Abeliovich A.

Nature. 2012 Aug 30;488(7413):652-5. doi: 10.1038/nature11333.

PMID:
22902501
[PubMed - indexed for MEDLINE]
18.

Global changes in DNA methylation and hydroxymethylation in Alzheimer's disease human brain.

Coppieters N, Dieriks BV, Lill C, Faull RL, Curtis MA, Dragunow M.

Neurobiol Aging. 2014 Jun;35(6):1334-44. doi: 10.1016/j.neurobiolaging.2013.11.031. Epub 2013 Dec 4.

PMID:
24387984
[PubMed - in process]
19.

Excision of 5-hydroxymethylcytosine by DEMETER family DNA glycosylases.

Jang H, Shin H, Eichman BF, Huh JH.

Biochem Biophys Res Commun. 2014 Apr 18;446(4):1067-72. doi: 10.1016/j.bbrc.2014.03.060. Epub 2014 Mar 21.

PMID:
24661881
[PubMed - indexed for MEDLINE]
20.

Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase.

Raiber EA, Beraldi D, Ficz G, Burgess HE, Branco MR, Murat P, Oxley D, Booth MJ, Reik W, Balasubramanian S.

Genome Biol. 2012 Aug 17;13(8):R69. doi: 10.1186/gb-2012-13-8-r69.

PMID:
22902005
[PubMed - in process]
Free PMC Article

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