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Results: 1 to 20 of 70

1.

Functional predictions from inference and observation in sequence-based inflammatory bowel disease research.

Meyer F, Trimble WL, Chang EB, Handley KM.

Genome Biol. 2012;13(9):169.

PMID:
23013527
[PubMed]
Free PMC Article
2.

A metagenomic insight into our gut's microbiome.

Lepage P, Leclerc MC, Joossens M, Mondot S, Blottière HM, Raes J, Ehrlich D, Doré J.

Gut. 2013 Jan;62(1):146-58. doi: 10.1136/gutjnl-2011-301805. Epub 2012 Apr 23. Review.

PMID:
22525886
[PubMed - indexed for MEDLINE]
3.

Gut microbiome-host interactions in health and disease.

Kinross JM, Darzi AW, Nicholson JK.

Genome Med. 2011 Mar 4;3(3):14. doi: 10.1186/gm228.

PMID:
21392406
[PubMed]
Free PMC Article
4.

Metagenomics: key to human gut microbiota.

Maccaferri S, Biagi E, Brigidi P.

Dig Dis. 2011;29(6):525-30. doi: 10.1159/000332966. Epub 2011 Dec 12. Review.

PMID:
22179207
[PubMed - indexed for MEDLINE]
5.

Implications of the human microbiome in inflammatory bowel diseases.

Bakhtiar SM, LeBlanc JG, Salvucci E, Ali A, Martin R, Langella P, Chatel JM, Miyoshi A, Bermúdez-Humarán LG, Azevedo V.

FEMS Microbiol Lett. 2013 May;342(1):10-7. doi: 10.1111/1574-6968.12111. Epub 2013 Mar 15. Review.

PMID:
23431991
[PubMed - indexed for MEDLINE]
6.

Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease.

Greenblum S, Turnbaugh PJ, Borenstein E.

Proc Natl Acad Sci U S A. 2012 Jan 10;109(2):594-9. doi: 10.1073/pnas.1116053109. Epub 2011 Dec 19.

PMID:
22184244
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Bioinformatic approaches for functional annotation and pathway inference in metagenomics data.

De Filippo C, Ramazzotti M, Fontana P, Cavalieri D.

Brief Bioinform. 2012 Nov;13(6):696-710. doi: 10.1093/bib/bbs070. Review.

PMID:
23175748
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

[Metagenomics of the intestinal microbiota: potential applications].

Dusko Ehrlich S; MetaHIT consortium.

Gastroenterol Clin Biol. 2010 Sep;34 Suppl 1:S23-8. doi: 10.1016/S0399-8320(10)70017-8. French.

PMID:
20889001
[PubMed - indexed for MEDLINE]
Free Article
9.

The human gut microbiome: implications for future health care.

Kinross JM, von Roon AC, Holmes E, Darzi A, Nicholson JK.

Curr Gastroenterol Rep. 2008 Aug;10(4):396-403. Review.

PMID:
18627653
[PubMed - indexed for MEDLINE]
10.

[Disease and metagenomics of intestinal microbiomes].

Hattori M.

Nihon Rinsho. 2009 Jun;67(6):1214-8. Japanese.

PMID:
19507517
[PubMed - indexed for MEDLINE]
11.

Inflammatory bowel disease, gut bacteria and probiotic therapy.

Reiff C, Kelly D.

Int J Med Microbiol. 2010 Jan;300(1):25-33. doi: 10.1016/j.ijmm.2009.08.004. Epub 2009 Oct 2. Review.

PMID:
19800289
[PubMed - indexed for MEDLINE]
12.

Application of metatranscriptomics to soil environments.

Carvalhais LC, Dennis PG, Tyson GW, Schenk PM.

J Microbiol Methods. 2012 Nov;91(2):246-51. doi: 10.1016/j.mimet.2012.08.011. Epub 2012 Aug 29. Review.

PMID:
22963791
[PubMed - indexed for MEDLINE]
13.

Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease.

Erickson AR, Cantarel BL, Lamendella R, Darzi Y, Mongodin EF, Pan C, Shah M, Halfvarson J, Tysk C, Henrissat B, Raes J, Verberkmoes NC, Fraser CM, Hettich RL, Jansson JK.

PLoS One. 2012;7(11):e49138. doi: 10.1371/journal.pone.0049138. Epub 2012 Nov 28.

PMID:
23209564
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The oral microbiome in health and disease and the potential impact on personalized dental medicine.

Zarco MF, Vess TJ, Ginsburg GS.

Oral Dis. 2012 Mar;18(2):109-20. doi: 10.1111/j.1601-0825.2011.01851.x. Epub 2011 Sep 9. Review.

PMID:
21902769
[PubMed - indexed for MEDLINE]
15.

The human microbiome as a reservoir of antimicrobial resistance.

Penders J, Stobberingh EE, Savelkoul PH, Wolffs PF.

Front Microbiol. 2013 Apr 17;4:87. doi: 10.3389/fmicb.2013.00087. eCollection 2013.

PMID:
23616784
[PubMed]
Free PMC Article
16.

The human gutome: nutrigenomics of the host-microbiome interactions.

Dimitrov DV.

OMICS. 2011 Jul-Aug;15(7-8):419-30. doi: 10.1089/omi.2010.0109. Epub 2010 Dec 1. Review.

PMID:
21121704
[PubMed - indexed for MEDLINE]
17.

Deep sequencing of the oral microbiome reveals signatures of periodontal disease.

Liu B, Faller LL, Klitgord N, Mazumdar V, Ghodsi M, Sommer DD, Gibbons TR, Treangen TJ, Chang YC, Li S, Stine OC, Hasturk H, Kasif S, Segrè D, Pop M, Amar S.

PLoS One. 2012;7(6):e37919. doi: 10.1371/journal.pone.0037919. Epub 2012 Jun 4.

PMID:
22675498
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Functional metagenomics: recent advances and future challenges.

Chistoserdovai L.

Biotechnol Genet Eng Rev. 2010;26:335-52. Review.

PMID:
21415887
[PubMed - indexed for MEDLINE]
19.

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes.

Tasse L, Bercovici J, Pizzut-Serin S, Robe P, Tap J, Klopp C, Cantarel BL, Coutinho PM, Henrissat B, Leclerc M, Doré J, Monsan P, Remaud-Simeon M, Potocki-Veronese G.

Genome Res. 2010 Nov;20(11):1605-12. doi: 10.1101/gr.108332.110. Epub 2010 Sep 14.

PMID:
20841432
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

A case study for large-scale human microbiome analysis using JCVI's metagenomics reports (METAREP).

Goll J, Thiagarajan M, Abubucker S, Huttenhower C, Yooseph S, Methé BA.

PLoS One. 2012;7(6):e29044. doi: 10.1371/journal.pone.0029044. Epub 2012 Jun 13.

PMID:
22719821
[PubMed - indexed for MEDLINE]
Free PMC Article

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