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Results: 1 to 20 of 97

1.

RNA processing in the minimal organism Nanoarchaeum equitans.

Randau L.

Genome Biol. 2012 Jul 18;13(7):R63. doi: 10.1186/gb-2012-13-7-r63.

PMID:
22809431
[PubMed - in process]
Free PMC Article
2.

C/D box sRNA, CRISPR RNA and tRNA processing in an archaeon with a minimal fragmented genome.

Richter H, Mohr S, Randau L.

Biochem Soc Trans. 2013 Feb 1;41(1):411-5. doi: 10.1042/BST20120276. Review.

PMID:
23356320
[PubMed - indexed for MEDLINE]
3.

Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves.

Randau L, Münch R, Hohn MJ, Jahn D, Söll D.

Nature. 2005 Feb 3;433(7025):537-41.

PMID:
15690044
[PubMed - indexed for MEDLINE]
4.

RNA-Seq analyses reveal the order of tRNA processing events and the maturation of C/D box and CRISPR RNAs in the hyperthermophile Methanopyrus kandleri.

Su AA, Tripp V, Randau L.

Nucleic Acids Res. 2013 Jul;41(12):6250-8. doi: 10.1093/nar/gkt317. Epub 2013 Apr 25.

PMID:
23620296
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The complete set of tRNA species in Nanoarchaeum equitans.

Randau L, Pearson M, Söll D.

FEBS Lett. 2005 May 23;579(13):2945-7.

PMID:
15893316
[PubMed - indexed for MEDLINE]
Free Article
6.

The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves.

Randau L, Calvin K, Hall M, Yuan J, Podar M, Li H, Söll D.

Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):17934-9. Epub 2005 Dec 5.

PMID:
16330750
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Analysis of Nanoarchaeum equitans genome and proteome composition: indications for hyperthermophilic and parasitic adaptation.

Das S, Paul S, Bag SK, Dutta C.

BMC Genomics. 2006 Jul 25;7:186.

PMID:
16869956
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Discovery of a minimal form of RNase P in Pyrobaculum.

Lai LB, Chan PP, Cozen AE, Bernick DL, Brown JW, Gopalan V, Lowe TM.

Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22493-8. doi: 10.1073/pnas.1013969107. Epub 2010 Dec 6.

PMID:
21135215
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs.

Coughlin DJ, Pleiss JA, Walker SC, Whitworth GB, Engelke DR.

Proc Natl Acad Sci U S A. 2008 Aug 26;105(34):12218-23. doi: 10.1073/pnas.0801906105. Epub 2008 Aug 19.

PMID:
18713869
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Small regulatory RNAs in Archaea.

Babski J, Maier LK, Heyer R, Jaschinski K, Prasse D, Jäger D, Randau L, Schmitz RA, Marchfelder A, Soppa J.

RNA Biol. 2014 May;11(5):484-93. Epub 2014 Mar 31.

PMID:
24755959
[PubMed - in process]
Free Article
11.

SPLITS: a new program for predicting split and intron-containing tRNA genes at the genome level.

Sugahara J, Yachie N, Sekine Y, Soma A, Matsui M, Tomita M, Kanai A.

In Silico Biol. 2006;6(5):411-8.

PMID:
17274770
[PubMed - indexed for MEDLINE]
12.

Sequential 2'-O-methylation of archaeal pre-tRNATrp nucleotides is guided by the intron-encoded but trans-acting box C/D ribonucleoprotein of pre-tRNA.

Singh SK, Gurha P, Tran EJ, Maxwell ES, Gupta R.

J Biol Chem. 2004 Nov 12;279(46):47661-71. Epub 2004 Sep 3.

PMID:
15347671
[PubMed - indexed for MEDLINE]
Free Article
13.

Sequence evidence in the archaeal genomes that tRNAs emerged through the combination of ancestral genes as 5' and 3' tRNA halves.

Fujishima K, Sugahara J, Tomita M, Kanai A.

PLoS One. 2008 Feb 20;3(2):e1622. doi: 10.1371/journal.pone.0001622.

PMID:
18286179
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The split genes of Nanoarchaeum equitans are an ancestral character.

Di Giulio M.

Gene. 2008 Sep 15;421(1-2):20-6. doi: 10.1016/j.gene.2008.06.010. Epub 2008 Jun 11.

PMID:
18590807
[PubMed - indexed for MEDLINE]
15.

Life without RNase P.

Randau L, Schröder I, Söll D.

Nature. 2008 May 1;453(7191):120-3. doi: 10.1038/nature06833.

PMID:
18451863
[PubMed - indexed for MEDLINE]
16.

Plant dicistronic tRNA-snoRNA genes: a new mode of expression of the small nucleolar RNAs processed by RNase Z.

Kruszka K, Barneche F, Guyot R, Ailhas J, Meneau I, Schiffer S, Marchfelder A, Echeverría M.

EMBO J. 2003 Feb 3;22(3):621-32.

PMID:
12554662
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032.

Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J.

BMC Genomics. 2013 Oct 19;14:714. doi: 10.1186/1471-2164-14-714.

PMID:
24138339
[PubMed - in process]
Free PMC Article
18.

Circularly permuted tRNA genes: their expression and implications for their physiological relevance and development.

Soma A.

Front Genet. 2014 Apr 1;5:63. doi: 10.3389/fgene.2014.00063. eCollection 2014. Review.

PMID:
24744771
[PubMed]
Free PMC Article
19.

Protein trans-splicing and characterization of a split family B-type DNA polymerase from the hyperthermophilic archaeal parasite Nanoarchaeum equitans.

Choi JJ, Nam KH, Min B, Kim SJ, Söll D, Kwon ST.

J Mol Biol. 2006 Mar 10;356(5):1093-106. Epub 2005 Dec 27.

PMID:
16412462
[PubMed - indexed for MEDLINE]
20.

The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism.

Waters E, Hohn MJ, Ahel I, Graham DE, Adams MD, Barnstead M, Beeson KY, Bibbs L, Bolanos R, Keller M, Kretz K, Lin X, Mathur E, Ni J, Podar M, Richardson T, Sutton GG, Simon M, Soll D, Stetter KO, Short JM, Noordewier M.

Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12984-8. Epub 2003 Oct 17.

PMID:
14566062
[PubMed - indexed for MEDLINE]
Free PMC Article

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