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Results: 1 to 20 of 97

1.

The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation.

Blanc G, Agarkova I, Grimwood J, Kuo A, Brueggeman A, Dunigan DD, Gurnon J, Ladunga I, Lindquist E, Lucas S, Pangilinan J, Pröschold T, Salamov A, Schmutz J, Weeks D, Yamada T, Lomsadze A, Borodovsky M, Claverie JM, Grigoriev IV, Van Etten JL.

Genome Biol. 2012 May 25;13(5):R39. doi: 10.1186/gb-2012-13-5-r39.

PMID:
22630137
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Adaptive evolution of chloroplast genome structure inferred using a parametric bootstrap approach.

Cui L, Leebens-Mack J, Wang LS, Tang J, Rymarquis L, Stern DB, dePamphilis CW.

BMC Evol Biol. 2006 Feb 9;6:13.

PMID:
16469102
[PubMed - indexed for MEDLINE]
Free PMC Article
3.
4.

Genomic organization and evolution of the Atlantic salmon hemoglobin repertoire.

Quinn NL, Boroevich KA, Lubieniecki KP, Chow W, Davidson EA, Phillips RB, Koop BF, Davidson WS.

BMC Genomics. 2010 Oct 5;11:539. doi: 10.1186/1471-2164-11-539.

PMID:
20923558
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evolutionary significance of an algal gene encoding an [FeFe]-hydrogenase with F-domain homology and hydrogenase activity in Chlorella variabilis NC64A.

Meuser JE, Boyd ES, Ananyev G, Karns D, Radakovits R, Narayana Murthy UM, Ghirardi ML, Dismukes GC, Peters JW, Posewitz MC.

Planta. 2011 Oct;234(4):829-43. doi: 10.1007/s00425-011-1431-y. Epub 2011 Jun 5.

PMID:
21643991
[PubMed - indexed for MEDLINE]
6.

Red and green algal origin of diatom membrane transporters: insights into environmental adaptation and cell evolution.

Chan CX, Reyes-Prieto A, Bhattacharya D.

PLoS One. 2011;6(12):e29138. doi: 10.1371/journal.pone.0029138. Epub 2011 Dec 14.

PMID:
22195008
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Extensive synteny conservation of holocentric chromosomes in Lepidoptera despite high rates of local genome rearrangements.

d'Alençon E, Sezutsu H, Legeai F, Permal E, Bernard-Samain S, Gimenez S, Gagneur C, Cousserans F, Shimomura M, Brun-Barale A, Flutre T, Couloux A, East P, Gordon K, Mita K, Quesneville H, Fournier P, Feyereisen R.

Proc Natl Acad Sci U S A. 2010 Apr 27;107(17):7680-5. doi: 10.1073/pnas.0910413107. Epub 2010 Apr 13.

PMID:
20388903
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Conserved synteny at the protein family level reveals genes underlying Shewanella species' cold tolerance and predicts their novel phenotypes.

Karpinets TV, Obraztsova AY, Wang Y, Schmoyer DD, Kora GH, Park BH, Serres MH, Romine MF, Land ML, Kothe TB, Fredrickson JK, Nealson KH, Uberbacher EC.

Funct Integr Genomics. 2010 Mar;10(1):97-110. doi: 10.1007/s10142-009-0142-y. Epub 2009 Oct 3.

PMID:
19802638
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Oil accumulation mechanisms of the oleaginous microalga Chlorella protothecoides revealed through its genome, transcriptomes, and proteomes.

Gao C, Wang Y, Shen Y, Yan D, He X, Dai J, Wu Q.

BMC Genomics. 2014 Jul 10;15:582. doi: 10.1186/1471-2164-15-582.

PMID:
25012212
[PubMed - in process]
Free PMC Article
10.

Cyanidioschyzon merolae genome. A tool for facilitating comparable studies on organelle biogenesis in photosynthetic eukaryotes.

Misumi O, Matsuzaki M, Nozaki H, Miyagishima SY, Mori T, Nishida K, Yagisawa F, Yoshida Y, Kuroiwa H, Kuroiwa T.

Plant Physiol. 2005 Feb;137(2):567-85. Epub 2005 Jan 28.

PMID:
15681662
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms.

Sinha AU, Meller J.

BMC Bioinformatics. 2007 Mar 8;8:82.

PMID:
17343765
[PubMed - indexed for MEDLINE]
Free PMC Article
12.
13.

Shewanella spp. genomic evolution for a cold marine lifestyle and in-situ explosive biodegradation.

Zhao JS, Deng Y, Manno D, Hawari J.

PLoS One. 2010 Feb 8;5(2):e9109. doi: 10.1371/journal.pone.0009109.

PMID:
20174598
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex.

Blanc G, Duncan G, Agarkova I, Borodovsky M, Gurnon J, Kuo A, Lindquist E, Lucas S, Pangilinan J, Polle J, Salamov A, Terry A, Yamada T, Dunigan DD, Grigoriev IV, Claverie JM, Van Etten JL.

Plant Cell. 2010 Sep;22(9):2943-55. doi: 10.1105/tpc.110.076406. Epub 2010 Sep 17.

PMID:
20852019
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi.

Hane JK, Rouxel T, Howlett BJ, Kema GH, Goodwin SB, Oliver RP.

Genome Biol. 2011;12(5):R45. doi: 10.1186/gb-2011-12-5-r45. Epub 2011 May 24.

PMID:
21605470
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Comparative genomics of ParaHox clusters of teleost fishes: gene cluster breakup and the retention of gene sets following whole genome duplications.

Siegel N, Hoegg S, Salzburger W, Braasch I, Meyer A.

BMC Genomics. 2007 Sep 6;8:312.

PMID:
17822543
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation.

Allen MA, Lauro FM, Williams TJ, Burg D, Siddiqui KS, De Francisci D, Chong KW, Pilak O, Chew HH, De Maere MZ, Ting L, Katrib M, Ng C, Sowers KR, Galperin MY, Anderson IJ, Ivanova N, Dalin E, Martinez M, Lapidus A, Hauser L, Land M, Thomas T, Cavicchioli R.

ISME J. 2009 Sep;3(9):1012-35. doi: 10.1038/ismej.2009.45. Epub 2009 Apr 30.

PMID:
19404327
[PubMed - indexed for MEDLINE]
19.

Analysis of expressed sequence tags from the antarctic psychrophilic green algae, Pyramimonas gelidicola.

Jung W, Lee SG, Kang SW, Lee YS, Lee JH, Kang SH, Jin ES, Kim HJ.

J Microbiol Biotechnol. 2012 Jul;22(7):902-6.

PMID:
22580308
[PubMed - indexed for MEDLINE]
Free Article
20.

Gene synteny comparisons between different vertebrates provide new insights into breakage and fusion events during mammalian karyotype evolution.

Kemkemer C, Kohn M, Cooper DN, Froenicke L, Högel J, Hameister H, Kehrer-Sawatzki H.

BMC Evol Biol. 2009 Apr 24;9:84. doi: 10.1186/1471-2148-9-84.

PMID:
19393055
[PubMed - indexed for MEDLINE]
Free PMC Article

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