Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 129

1.

High-throughput RNA interference screening using pooled shRNA libraries and next generation sequencing.

Sims D, Mendes-Pereira AM, Frankum J, Burgess D, Cerone MA, Lombardelli C, Mitsopoulos C, Hakas J, Murugaesu N, Isacke CM, Fenwick K, Assiotis I, Kozarewa I, Zvelebil M, Ashworth A, Lord CJ.

Genome Biol. 2011 Oct 21;12(10):R104. doi: 10.1186/gb-2011-12-10-r104.

PMID:
22018332
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Pooled shRNA screenings: computational analysis.

Yu J, Putcha P, Califano A, Silva JM.

Methods Mol Biol. 2013;980:371-84. doi: 10.1007/978-1-62703-287-2_22.

PMID:
23359167
[PubMed - indexed for MEDLINE]
3.

Criteria for effective design, construction, and gene knockdown by shRNA vectors.

Taxman DJ, Livingstone LR, Zhang J, Conti BJ, Iocca HA, Williams KL, Lich JD, Ting JP, Reed W.

BMC Biotechnol. 2006 Jan 24;6:7.

PMID:
16433925
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Development of methods for quantitative comparison of pooled shRNAs by mass sequencing.

Hoshiyama H, Tang J, Batten K, Xiao G, Rouillard JM, Shay JW, Xie Y, Wright WE.

J Biomol Screen. 2012 Feb;17(2):258-65. doi: 10.1177/1087057111423101. Epub 2011 Sep 28.

PMID:
21956173
[PubMed - indexed for MEDLINE]
5.

Enzymatic production of RNAi libraries from cDNAs.

Shirane D, Sugao K, Namiki S, Tanabe M, Iino M, Hirose K.

Nat Genet. 2004 Feb;36(2):190-6. Epub 2004 Jan 4.

PMID:
14704669
[PubMed - indexed for MEDLINE]
Free Article
6.

MISSION LentiPlex pooled shRNA library screening in mammalian cells.

Coussens MJ, Corman C, Fischer AL, Sago J, Swarthout J.

J Vis Exp. 2011 Dec 21;(58). pii: 3305. doi: 10.3791/3305.

PMID:
22215108
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Disturbance of the microRNA pathway by commonly used lentiviral shRNA libraries limits the application for screening host factors involved in hepatitis C virus infection.

Pan Q, de Ruiter PE, von Eije KJ, Smits R, Kwekkeboom J, Tilanus HW, Berkhout B, Janssen HL, van der Laan LJ.

FEBS Lett. 2011 Apr 6;585(7):1025-30. doi: 10.1016/j.febslet.2011.02.035. Epub 2011 Mar 2.

PMID:
21376045
[PubMed - indexed for MEDLINE]
Free Article
8.

Enzymatic production of RNAi libraries from cDNAs and high-throughput selection of effective shRNA expression constructs.

Sugao K, Hirose K.

Methods Mol Biol. 2011;729:123-39. doi: 10.1007/978-1-61779-065-2_8.

PMID:
21365487
[PubMed - indexed for MEDLINE]
9.

Pooled shRNA screenings: experimental approach.

Rodriguez-Barrueco R, Marshall N, Silva JM.

Methods Mol Biol. 2013;980:353-70. doi: 10.1007/978-1-62703-287-2_21.

PMID:
23359166
[PubMed - indexed for MEDLINE]
10.

Pooled lentiviral shRNA screening for functional genomics in mammalian cells.

Blakely K, Ketela T, Moffat J.

Methods Mol Biol. 2011;781:161-82. doi: 10.1007/978-1-61779-276-2_9.

PMID:
21877282
[PubMed - indexed for MEDLINE]
11.

A shRNA library constructed through the generation of loop-stem-loop DNA.

Nishikawa Y, Sugiyama T.

J Gene Med. 2010 Nov;12(11):927-33. doi: 10.1002/jgm.1513. Epub 2010 Oct 29.

PMID:
21105152
[PubMed - indexed for MEDLINE]
12.

Design and evaluation of genome-wide libraries for RNA interference screens.

Horn T, Sandmann T, Boutros M.

Genome Biol. 2010;11(6):R61. doi: 10.1186/gb-2010-11-6-r61. Epub 2010 Jun 15.

PMID:
20550664
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Optimized PCR conditions and increased shRNA fold representation improve reproducibility of pooled shRNA screens.

Strezoska Ž, Licon A, Haimes J, Spayd KJ, Patel KM, Sullivan K, Jastrzebski K, Simpson KJ, Leake D, van Brabant Smith A, Vermeulen A.

PLoS One. 2012;7(8):e42341. doi: 10.1371/journal.pone.0042341. Epub 2012 Aug 1.

PMID:
22870320
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-scale loss-of-function screening with a lentiviral RNAi library.

Root DE, Hacohen N, Hahn WC, Lander ES, Sabatini DM.

Nat Methods. 2006 Sep;3(9):715-9. Review.

PMID:
16929317
[PubMed - indexed for MEDLINE]
15.

Design of lentivirally expressed siRNAs.

Liu YP, Berkhout B.

Methods Mol Biol. 2013;942:233-57. doi: 10.1007/978-1-62703-119-6_13.

PMID:
23027055
[PubMed - indexed for MEDLINE]
16.

A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen.

Moffat J, Grueneberg DA, Yang X, Kim SY, Kloepfer AM, Hinkle G, Piqani B, Eisenhaure TM, Luo B, Grenier JK, Carpenter AE, Foo SY, Stewart SA, Stockwell BR, Hacohen N, Hahn WC, Lander ES, Sabatini DM, Root DE.

Cell. 2006 Mar 24;124(6):1283-98.

PMID:
16564017
[PubMed - indexed for MEDLINE]
Free Article
17.

An arrayed genome-scale lentiviral-enabled short hairpin RNA screen identifies lethal and rescuer gene candidates.

Bhinder B, Antczak C, Ramirez CN, Shum D, Liu-Sullivan N, Radu C, Frattini MG, Djaballah H.

Assay Drug Dev Technol. 2013 Apr;11(3):173-90. doi: 10.1089/adt.2012.475. Epub 2012 Nov 30.

PMID:
23198867
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A primer on using pooled shRNA libraries for functional genomic screens.

Hu G, Luo J.

Acta Biochim Biophys Sin (Shanghai). 2012 Feb;44(2):103-12. doi: 10.1093/abbs/gmr116. Review.

PMID:
22271906
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

shRNA libraries and their use in cancer genetics.

Bernards R, Brummelkamp TR, Beijersbergen RL.

Nat Methods. 2006 Sep;3(9):701-6. Review.

PMID:
16929315
[PubMed - indexed for MEDLINE]
20.

Enzymatically prepared RNAi libraries.

Buchholz F, Kittler R, Slabicki M, Theis M.

Nat Methods. 2006 Sep;3(9):696-700. Review.

PMID:
16929314
[PubMed - indexed for MEDLINE]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk