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Results: 1 to 20 of 182

1.

Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome.

Saintenac C, Jiang D, Akhunov ED.

Genome Biol. 2011 Sep 14;12(9):R88. doi: 10.1186/gb-2011-12-9-r88.

PMID:
21917144
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes.

Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Deal KR, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo H, Huo N, Lazo GR, Luo MC, Ma YQ, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J.

BMC Genomics. 2010 Dec 14;11:702. doi: 10.1186/1471-2164-11-702.

PMID:
21156062
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Comparative sequence analysis of the phytochrome C gene and its upstream region in allohexaploid wheat reveals new data on the evolution of its three constituent genomes.

Devos KM, Beales J, Ogihara Y, Doust AN.

Plant Mol Biol. 2005 Jul;58(5):625-41.

PMID:
16158239
[PubMed - indexed for MEDLINE]
4.

Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat.

Akhunov ED, Sehgal S, Liang H, Wang S, Akhunova AR, Kaur G, Li W, Forrest KL, See D, Simková H, Ma Y, Hayden MJ, Luo M, Faris JD, Dolezel J, Gill BS.

Plant Physiol. 2013 Jan;161(1):252-65. doi: 10.1104/pp.112.205161. Epub 2012 Nov 1.

PMID:
23124323
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Targeted re-sequencing of the allohexaploid wheat exome.

Winfield MO, Wilkinson PA, Allen AM, Barker GL, Coghill JA, Burridge A, Hall A, Brenchley RC, D'Amore R, Hall N, Bevan MW, Richmond T, Gerhardt DJ, Jeddeloh JA, Edwards KJ.

Plant Biotechnol J. 2012 Aug;10(6):733-42. doi: 10.1111/j.1467-7652.2012.00713.x. Epub 2012 Jun 18.

PMID:
22703335
[PubMed - indexed for MEDLINE]
6.

Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat.

Bartoš J, Vlček C, Choulet F, Džunková M, Cviková K, Safář J, Simková H, Pačes J, Strnad H, Sourdille P, Bergès H, Cattonaro F, Feuillet C, Doležel J.

BMC Plant Biol. 2012 Aug 30;12:155.

PMID:
22935214
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Analysis of the bread wheat genome using whole-genome shotgun sequencing.

Brenchley R, Spannagl M, Pfeifer M, Barker GL, D'Amore R, Allen AM, McKenzie N, Kramer M, Kerhornou A, Bolser D, Kay S, Waite D, Trick M, Bancroft I, Gu Y, Huo N, Luo MC, Sehgal S, Gill B, Kianian S, Anderson O, Kersey P, Dvorak J, McCombie WR, Hall A, Mayer KF, Edwards KJ, Bevan MW, Hall N.

Nature. 2012 Nov 29;491(7426):705-10. doi: 10.1038/nature11650.

PMID:
23192148
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Homoeolog-specific transcriptional bias in allopolyploid wheat.

Akhunova AR, Matniyazov RT, Liang H, Akhunov ED.

BMC Genomics. 2010 Sep 17;11:505. doi: 10.1186/1471-2164-11-505.

PMID:
20849627
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Simultaneous mutation detection of three homoeologous genes in wheat by High Resolution Melting analysis and Mutation Surveyor.

Dong C, Vincent K, Sharp P.

BMC Plant Biol. 2009 Dec 4;9:143. doi: 10.1186/1471-2229-9-143.

PMID:
19958559
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B.

Paux E, Roger D, Badaeva E, Gay G, Bernard M, Sourdille P, Feuillet C.

Plant J. 2006 Nov;48(3):463-74. Epub 2006 Sep 29.

PMID:
17010109
[PubMed - indexed for MEDLINE]
11.

Wheat beta-expansin (EXPB11) genes: Identification of the expressed gene on chromosome 3BS carrying a pollen allergen domain.

Breen J, Li D, Dunn DS, Békés F, Kong X, Zhang J, Jia J, Wicker T, Mago R, Ma W, Bellgard M, Appels R.

BMC Plant Biol. 2010 May 27;10:99. doi: 10.1186/1471-2229-10-99.

PMID:
20507562
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genome-wide analysis of Stowaway-like MITEs in wheat reveals high sequence conservation, gene association, and genomic diversification.

Yaakov B, Ben-David S, Kashkush K.

Plant Physiol. 2013 Jan;161(1):486-96. doi: 10.1104/pp.112.204404. Epub 2012 Oct 26.

PMID:
23104862
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective.

Bombarely A, Edwards KD, Sanchez-Tamburrino J, Mueller LA.

BMC Genomics. 2012 Aug 17;13:406. doi: 10.1186/1471-2164-13-406.

PMID:
22900718
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat.

Zhang Z, Belcram H, Gornicki P, Charles M, Just J, Huneau C, Magdelenat G, Couloux A, Samain S, Gill BS, Rasmussen JB, Barbe V, Faris JD, Chalhoub B.

Proc Natl Acad Sci U S A. 2011 Nov 15;108(46):18737-42. doi: 10.1073/pnas.1110552108. Epub 2011 Oct 31. Erratum in: Proc Natl Acad Sci U S A. 2012 Jan 24;109(4):1353.

PMID:
22042872
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genome-specific primer sets for starch biosynthesis genes in wheat.

Blake NK, Sherman JD, Dvorák J, Talbert LE.

Theor Appl Genet. 2004 Oct;109(6):1295-1302.

PMID:
15340684
[PubMed - indexed for MEDLINE]
16.

Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat.

Trick M, Adamski NM, Mugford SG, Jiang CC, Febrer M, Uauy C.

BMC Plant Biol. 2012 Jan 26;12:14. doi: 10.1186/1471-2229-12-14.

PMID:
22280551
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Chromosome mapping and phylogenetic analysis of the cytosolic acetyl-CoA carboxylase loci in wheat.

Faris J, Sirikhachornkit A, Haselkorn R, Gill B, Gornicki P.

Mol Biol Evol. 2001 Sep;18(9):1720-33.

PMID:
11504852
[PubMed - indexed for MEDLINE]
Free Article
18.

Rapid genome evolution revealed by comparative sequence analysis of orthologous regions from four triticeae genomes.

Gu YQ, Coleman-Derr D, Kong X, Anderson OD.

Plant Physiol. 2004 May;135(1):459-70. Epub 2004 Apr 30.

PMID:
15122014
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Comparative analysis of mitochondrial genomes between a wheat K-type cytoplasmic male sterility (CMS) line and its maintainer line.

Liu H, Cui P, Zhan K, Lin Q, Zhuo G, Guo X, Ding F, Yang W, Liu D, Hu S, Yu J, Zhang A.

BMC Genomics. 2011 Mar 29;12:163. doi: 10.1186/1471-2164-12-163.

PMID:
21443807
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Relationship between homoeologous regulatory and structural genes in allopolyploid genome - a case study in bread wheat.

Khlestkina EK, Röder MS, Salina EA.

BMC Plant Biol. 2008 Aug 13;8:88. doi: 10.1186/1471-2229-8-88.

PMID:
18700978
[PubMed - indexed for MEDLINE]
Free PMC Article

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