Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 98

1.

Hybrid selection for sequencing pathogen genomes from clinical samples.

Melnikov A, Galinsky K, Rogov P, Fennell T, Van Tyne D, Russ C, Daniels R, Barnes KG, Bochicchio J, Ndiaye D, Sene PD, Wirth DF, Nusbaum C, Volkman SK, Birren BW, Gnirke A, Neafsey DE.

Genome Biol. 2011 Aug 11;12(8):R73. doi: 10.1186/gb-2011-12-8-r73.

PMID:
21835008
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genome sequence of the human malaria parasite Plasmodium falciparum.

Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan MS, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DM, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B.

Nature. 2002 Oct 3;419(6906):498-511.

PMID:
12368864
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

A status report on the sequencing and annotation of the P. falciparum genome.

Gardner MJ.

Mol Biochem Parasitol. 2001 Dec;118(2):133-8. Review.

PMID:
11738703
[PubMed - indexed for MEDLINE]
4.

Curation of the Plasmodium falciparum genome.

Berry AE, Gardner MJ, Caspers GJ, Roos DS, Berriman M.

Trends Parasitol. 2004 Dec;20(12):548-52. Review.

PMID:
15522662
[PubMed - indexed for MEDLINE]
5.

High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum.

Samarakoon U, Regier A, Tan A, Desany BA, Collins B, Tan JC, Emrich SJ, Ferdig MT.

BMC Genomics. 2011 Feb 17;12:116. doi: 10.1186/1471-2164-12-116.

PMID:
21324207
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The genomics of malaria infection.

Coppel RL, Roos DS, Bozdech Z.

Trends Parasitol. 2004 Dec;20(12):553-7. Review.

PMID:
15522663
[PubMed - indexed for MEDLINE]
7.

Malaria research. Parasite genome sequenced, scrutinized.

Pennisi E.

Science. 2002 Oct 4;298(5591):33-4.

PMID:
12364754
[PubMed - indexed for MEDLINE]
8.

Efficient depletion of host DNA contamination in malaria clinical sequencing.

Oyola SO, Gu Y, Manske M, Otto TD, O'Brien J, Alcock D, Macinnis B, Berriman M, Newbold CI, Kwiatkowski DP, Swerdlow HP, Quail MA.

J Clin Microbiol. 2013 Mar;51(3):745-51. doi: 10.1128/JCM.02507-12. Epub 2012 Dec 5.

PMID:
23224084
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Pooled deep sequencing of Plasmodium falciparum isolates: an efficient and scalable tool to quantify prevailing malaria drug-resistance genotypes.

Taylor SM, Parobek CM, Aragam N, Ngasala BE, Mårtensson A, Meshnick SR, Juliano JJ.

J Infect Dis. 2013 Dec 15;208(12):1998-2006. doi: 10.1093/infdis/jit392. Epub 2013 Aug 1.

PMID:
23908494
[PubMed - indexed for MEDLINE]
10.

An effective method to purify Plasmodium falciparum DNA directly from clinical blood samples for whole genome high-throughput sequencing.

Auburn S, Campino S, Clark TG, Djimde AA, Zongo I, Pinches R, Manske M, Mangano V, Alcock D, Anastasi E, Maslen G, Macinnis B, Rockett K, Modiano D, Newbold CI, Doumbo OK, Ouédraogo JB, Kwiatkowski DP.

PLoS One. 2011;6(7):e22213. doi: 10.1371/journal.pone.0022213. Epub 2011 Jul 18.

PMID:
21789235
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genomic sequencing of Plasmodium falciparum malaria parasites from Senegal reveals the demographic history of the population.

Chang HH, Park DJ, Galinsky KJ, Schaffner SF, Ndiaye D, Ndir O, Mboup S, Wiegand RC, Volkman SK, Sabeti PC, Wirth DF, Neafsey DE, Hartl DL.

Mol Biol Evol. 2012 Nov;29(11):3427-39. doi: 10.1093/molbev/mss161. Epub 2012 Jun 24.

PMID:
22734050
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genetic diversity and population history of Plasmodium falciparum and Plasmodium vivax.

Joy DA, Mu J, Jiang H, Su X.

Parassitologia. 2006 Dec;48(4):561-6. Review. No abstract available.

PMID:
17688177
[PubMed - indexed for MEDLINE]
13.

The grand assault.

Doolittle RF.

Nature. 2002 Oct 3;419(6906):493-4. No abstract available. Erratum in: Nature 2002 Oct 24;419(6909):799.

PMID:
12368861
[PubMed - indexed for MEDLINE]
14.

Construction of bacterial artificial chromosome libraries from the parasitic nematode Brugia malayi and physical mapping of the genome of its Wolbachia endosymbiont.

Foster JM, Kumar S, Ganatra MB, Kamal IH, Ware J, Ingram J, Pope-Chappell J, Guiliano D, Whitton C, Daub J, Blaxter ML, Slatko BE.

Int J Parasitol. 2004 May;34(6):733-46.

PMID:
15111095
[PubMed - indexed for MEDLINE]
15.

Isolation of Plasmodium falciparum by flow-cytometry: implications for single-trophozoite genotyping and parasite DNA purification for whole-genome high-throughput sequencing of archival samples.

Boissière A, Arnathau C, Duperray C, Berry L, Lachaud L, Renaud F, Durand P, Prugnolle F.

Malar J. 2012 May 14;11:163. doi: 10.1186/1475-2875-11-163.

PMID:
22583664
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Genome sequencing. Closing in on a deadly parasite's genome.

Pennisi E.

Science. 2000 Oct 20;290(5491):439.

PMID:
11183759
[PubMed - indexed for MEDLINE]
17.

Detection of genome-wide polymorphisms in the AT-rich Plasmodium falciparum genome using a high-density microarray.

Jiang H, Yi M, Mu J, Zhang L, Ivens A, Klimczak LJ, Huyen Y, Stephens RM, Su XZ.

BMC Genomics. 2008 Aug 25;9:398. doi: 10.1186/1471-2164-9-398.

PMID:
18724869
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Temporal variation of the merozoite surface protein-2 gene of Plasmodium falciparum.

Eisen D, Billman-Jacobe H, Marshall VF, Fryauff D, Coppel RL.

Infect Immun. 1998 Jan;66(1):239-46.

PMID:
9423864
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Changes in malaria parasite drug resistance in an endemic population over a 25-year period with resulting genomic evidence of selection.

Nwakanma DC, Duffy CW, Amambua-Ngwa A, Oriero EC, Bojang KA, Pinder M, Drakeley CJ, Sutherland CJ, Milligan PJ, Macinnis B, Kwiatkowski DP, Clark TG, Greenwood BM, Conway DJ.

J Infect Dis. 2014 Apr 1;209(7):1126-35. doi: 10.1093/infdis/jit618. Epub 2013 Nov 21.

PMID:
24265439
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Microsatellite analysis of malaria parasites.

Orjuela-Sánchez P, Brandi MC, Ferreira MU.

Methods Mol Biol. 2013;1006:247-58. doi: 10.1007/978-1-62703-389-3_17.

PMID:
23546796
[PubMed - indexed for MEDLINE]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk