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Results: 1 to 20 of 106

1.

Single cell transcriptomics of neighboring hyphae of Aspergillus niger.

de Bekker C, Bruning O, Jonker MJ, Breit TM, Wösten HA.

Genome Biol. 2011 Aug 4;12(8):R71. doi: 10.1186/gb-2011-12-8-r71.

PMID:
21816052
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The carbon starvation response of Aspergillus niger during submerged cultivation: insights from the transcriptome and secretome.

Nitsche BM, Jørgensen TR, Akeroyd M, Meyer V, Ram AF.

BMC Genomics. 2012 Aug 8;13:380. doi: 10.1186/1471-2164-13-380.

PMID:
22873931
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Identification of modules in Aspergillus niger by gene co-expression network analysis.

van den Berg RA, Braaksma M, van der Veen D, van der Werf MJ, Punt PJ, van der Oost J, de Graaff LH.

Fungal Genet Biol. 2010 Jun;47(6):539-50. doi: 10.1016/j.fgb.2010.03.005. Epub 2010 Mar 27.

PMID:
20350613
[PubMed - indexed for MEDLINE]
4.

Assessment of the pectin degrading enzyme network of Aspergillus niger by functional genomics.

Martens-Uzunova ES, Schaap PJ.

Fungal Genet Biol. 2009 Mar;46 Suppl 1:S170-S179.

PMID:
19618506
[PubMed - indexed for MEDLINE]
5.

Phylogeny of fungal hemoglobins and expression analysis of the Aspergillus oryzae flavohemoglobin gene fhbA during hyphal growth.

te Biesebeke R, Levasseur A, Boussier A, Record E, van den Hondel CA, Punt PJ.

Fungal Biol. 2010 Feb-Mar;114(2-3):135-43.

PMID:
20960969
[PubMed - indexed for MEDLINE]
6.

Submerged conidiation and product formation by Aspergillus niger at low specific growth rates are affected in aerial developmental mutants.

Jørgensen TR, Nielsen KF, Arentshorst M, Park J, van den Hondel CA, Frisvad JC, Ram AF.

Appl Environ Microbiol. 2011 Aug;77(15):5270-7. doi: 10.1128/AEM.00118-11. Epub 2011 Jun 7.

PMID:
21652743
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway.

Jørgensen TR, Goosen T, Hondel CA, Ram AF, Iversen JJ.

BMC Genomics. 2009 Jan 23;10:44. doi: 10.1186/1471-2164-10-44.

PMID:
19166577
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Heterogenic expression of genes encoding secreted proteins at the periphery of Aspergillus niger colonies.

Vinck A, de Bekker C, Ossin A, Ohm RA, de Vries RP, Wösten HA.

Environ Microbiol. 2011 Jan;13(1):216-25. doi: 10.1111/j.1462-2920.2010.02322.x. Epub 2010 Aug 16.

PMID:
20722697
[PubMed - indexed for MEDLINE]
9.

GalX regulates the D-galactose oxido-reductive pathway in Aspergillus niger.

Gruben BS, Zhou M, de Vries RP.

FEBS Lett. 2012 Nov 16;586(22):3980-5. doi: 10.1016/j.febslet.2012.09.029. Epub 2012 Oct 12.

PMID:
23063944
[PubMed - indexed for MEDLINE]
Free Article
10.

In situ hybridisation in filamentous fungi using peptide nucleic acid probes.

Teertstra WR, Lugones LG, Wösten HA.

Fungal Genet Biol. 2004 Dec;41(12):1099-1103.

PMID:
15586449
[PubMed - indexed for MEDLINE]
11.

Reconstruction of signaling networks regulating fungal morphogenesis by transcriptomics.

Meyer V, Arentshorst M, Flitter SJ, Nitsche BM, Kwon MJ, Reynaga-Peña CG, Bartnicki-Garcia S, van den Hondel CA, Ram AF.

Eukaryot Cell. 2009 Nov;8(11):1677-91. doi: 10.1128/EC.00050-09. Epub 2009 Sep 11.

PMID:
19749177
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger.

Guillemette T, van Peij N, Goosen T, Lanthaler K, Robson GD, van den Hondel CA, Stam H, Archer DB.

BMC Genomics. 2007 Jun 11;8:158.

PMID:
17561995
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Database mining and transcriptional analysis of genes encoding inulin-modifying enzymes of Aspergillus niger.

Yuan XL, Goosen C, Kools H, van der Maarel MJ, van den Hondel CA, Dijkhuizen L, Ram AF.

Microbiology. 2006 Oct;152(Pt 10):3061-73.

PMID:
17005986
[PubMed - indexed for MEDLINE]
Free Article
14.

Flow cytometric purification of Colletotrichum higginsianum biotrophic hyphae from Arabidopsis leaves for stage-specific transcriptome analysis.

Takahara H, Dolf A, Endl E, O'Connell R.

Plant J. 2009 Aug;59(4):672-83. doi: 10.1111/j.1365-313X.2009.03896.x. Epub 2009 Apr 11.

PMID:
19392696
[PubMed - indexed for MEDLINE]
15.

Genes differentially expressed in conidia and hyphae of Aspergillus fumigatus upon exposure to human neutrophils.

Sugui JA, Kim HS, Zarember KA, Chang YC, Gallin JI, Nierman WC, Kwon-Chung KJ.

PLoS One. 2008 Jul 9;3(7):e2655. doi: 10.1371/journal.pone.0002655.

PMID:
18648542
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Dual transcriptional profiling of a bacterial/fungal confrontation: Collimonas fungivorans versus Aspergillus niger.

Mela F, Fritsche K, de Boer W, van Veen JA, de Graaff LH, van den Berg M, Leveau JH.

ISME J. 2011 Sep;5(9):1494-504. doi: 10.1038/ismej.2011.29. Epub 2011 May 26.

PMID:
21614084
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Effects of leader sequences upon the heterologous expression of restrictocin in Aspergillus nidulans and Aspergillus niger.

Brandhorst T, Kenealy WR.

Can J Microbiol. 1995 Jul;41(7):601-11.

PMID:
7641142
[PubMed - indexed for MEDLINE]
18.

[Aspergillus niger as a potential cellular factory: prior knowledge and key technology].

Guo Y, Zheng P, Sun J.

Sheng Wu Gong Cheng Xue Bao. 2010 Oct;26(10):1410-8. Review. Chinese.

PMID:
21218629
[PubMed - indexed for MEDLINE]
19.

Spatial differentiation in the vegetative mycelium of Aspergillus niger.

Levin AM, de Vries RP, Conesa A, de Bekker C, Talon M, Menke HH, van Peij NN, Wösten HA.

Eukaryot Cell. 2007 Dec;6(12):2311-22. Epub 2007 Oct 19.

PMID:
17951513
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Differences in the regulation of aldehyde dehydrogenase genes in Aspergillus niger and Aspergillus nidulans.

O'Connell MJ, Kelly JM.

Curr Genet. 1988 Aug;14(2):95-103.

PMID:
2846191
[PubMed - indexed for MEDLINE]

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