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Results: 1 to 20 of 110

1.

Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque.

Fang X, Zhang Y, Zhang R, Yang L, Li M, Ye K, Guo X, Wang J, Su B.

Genome Biol. 2011 Jul 6;12(7):R63. doi: 10.1186/gb-2011-12-7-r63.

PMID:
21733155
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta).

Fawcett GL, Raveendran M, Deiros DR, Chen D, Yu F, Harris RA, Ren Y, Muzny DM, Reid JG, Wheeler DA, Worley KC, Shelton SE, Kalin NH, Milosavljevic A, Gibbs R, Rogers J.

BMC Genomics. 2011 Jun 13;12:311. doi: 10.1186/1471-2164-12-311.

PMID:
21668978
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The rhesus macaque is three times as diverse but more closely equivalent in damaging coding variation as compared to the human.

Yuan Q, Zhou Z, Lindell SG, Higley JD, Ferguson B, Thompson RC, Lopez JF, Suomi SJ, Baghal B, Baker M, Mash DC, Barr CS, Goldman D.

BMC Genet. 2012 Jun 29;13:52. doi: 10.1186/1471-2156-13-52.

PMID:
22747632
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.

Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J, Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, Liu X, Ball EV, An N, Huang Q, Zhang Y, Fan W, Zhang X, Li Y, Wang W, Katze MG, Su B, Nielsen R, Yang H, Wang J, Wang X, Wang J.

Nat Biotechnol. 2011 Oct 16;29(11):1019-23. doi: 10.1038/nbt.1992.

PMID:
22002653
[PubMed - indexed for MEDLINE]
5.

Single nucleotide polymorphisms (SNPs) are highly conserved in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques.

Street SL, Kyes RC, Grant R, Ferguson B.

BMC Genomics. 2007 Dec 31;8:480. doi: 10.1186/1471-2164-8-480.

PMID:
18166133
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Evolutionary and biomedical insights from the rhesus macaque genome.

Rhesus Macaque Genome Sequencing and Analysis Consortium, Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, Hardison RC, Makova KD, Miller W, Milosavljevic A, Palermo RE, Siepel A, Sikela JM, Attaway T, Bell S, Bernard KE, Buhay CJ, Chandrabose MN, Dao M, Davis C, Delehaunty KD, Ding Y, Dinh HH, Dugan-Rocha S, Fulton LA, Gabisi RA, Garner TT, Godfrey J, Hawes AC, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Kirkness EF, Cree A, Fowler RG, Lee S, Lewis LR, Li Z, Liu YS, Moore SM, Muzny D, Nazareth LV, Ngo DN, Okwuonu GO, Pai G, Parker D, Paul HA, Pfannkoch C, Pohl CS, Rogers YH, Ruiz SJ, Sabo A, Santibanez J, Schneider BW, Smith SM, Sodergren E, Svatek AF, Utterback TR, Vattathil S, Warren W, White CS, Chinwalla AT, Feng Y, Halpern AL, Hillier LW, Huang X, Minx P, Nelson JO, Pepin KH, Qin X, Sutton GG, Venter E, Walenz BP, Wallis JW, Worley KC, Yang SP, Jones SM, Marra MA, Rocchi M, Schein JE, Baertsch R, Clarke L, Csürös M, Glasscock J, Harris RA, Havlak P, Jackson AR, Jiang H, Liu Y, Messina DN, Shen Y, Song HX, Wylie T, Zhang L, Birney E, Han K, Konkel MK, Lee J, Smit AF, Ullmer B, Wang H, Xing J, Burhans R, Cheng Z, Karro JE, Ma J, Raney B, She X, Cox MJ, Demuth JP, Dumas LJ, Han SG, Hopkins J, Karimpour-Fard A, Kim YH, Pollack JR, Vinar T, Addo-Quaye C, Degenhardt J, Denby A, Hubisz MJ, Indap A, Kosiol C, Lahn BT, Lawson HA, Marklein A, Nielsen R, Vallender EJ, Clark AG, Ferguson B, Hernandez RD, Hirani K, Kehrer-Sawatzki H, Kolb J, Patil S, Pu LL, Ren Y, Smith DG, Wheeler DA, Schenck I, Ball EV, Chen R, Cooper DN, Giardine B, Hsu F, Kent WJ, Lesk A, Nelson DL, O'brien WE, Prüfer K, Stenson PD, Wallace JC, Ke H, Liu XM, Wang P, Xiang AP, Yang F, Barber GP, Haussler D, Karolchik D, Kern AD, Kuhn RM, Smith KE, Zwieg AS.

Science. 2007 Apr 13;316(5822):222-34.

PMID:
17431167
[PubMed - indexed for MEDLINE]
Free Article
7.

Whole-genome sequencing of tibetan macaque (Macaca thibetana) provides new insight into the macaque evolutionary history.

Fan Z, Zhao G, Li P, Osada N, Xing J, Yi Y, Du L, Silva P, Wang H, Sakate R, Zhang X, Xu H, Yue B, Li J.

Mol Biol Evol. 2014 Jun;31(6):1475-89. doi: 10.1093/molbev/msu104. Epub 2014 Mar 18.

PMID:
24648498
[PubMed - in process]
Free PMC Article
8.

Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta).

Satkoski JA, Malhi R, Kanthaswamy S, Tito R, Malladi V, Smith D.

BMC Genomics. 2008 May 29;9:256. doi: 10.1186/1471-2164-9-256.

PMID:
18510772
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Single nucleotide polymorphisms (SNPs) distinguish Indian-origin and Chinese-origin rhesus macaques (Macaca mulatta).

Ferguson B, Street SL, Wright H, Pearson C, Jia Y, Thompson SL, Allibone P, Dubay CJ, Spindel E, Norgren RB Jr.

BMC Genomics. 2007 Feb 7;8:43.

PMID:
17286860
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Analysis of copy number variation in the rhesus macaque genome identifies candidate loci for evolutionary and human disease studies.

Lee AS, Gutiérrez-Arcelus M, Perry GH, Vallender EJ, Johnson WE, Miller GM, Korbel JO, Lee C.

Hum Mol Genet. 2008 Apr 15;17(8):1127-36. doi: 10.1093/hmg/ddn002. Epub 2008 Jan 7.

PMID:
18180252
[PubMed - indexed for MEDLINE]
Free Article
11.

4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta).

Trask JS, Garnica WT, Kanthaswamy S, Malhi RS, Smith DG.

Genomics. 2011 Nov;98(5):352-8. doi: 10.1016/j.ygeno.2011.08.004. Epub 2011 Aug 31.

PMID:
21907785
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta.

Osada N, Hashimoto K, Kameoka Y, Hirata M, Tanuma R, Uno Y, Inoue I, Hida M, Suzuki Y, Sugano S, Terao K, Kusuda J, Takahashi I.

BMC Genomics. 2008 Feb 24;9:90. doi: 10.1186/1471-2164-9-90.

PMID:
18294402
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Assessing natural introgression in 2 biomedical model species, the rhesus macaque (Macaca mulatta) and the long-tailed macaque (Macaca fascicularis).

Bonhomme M, Cuartero S, Blancher A, Crouau-Roy B.

J Hered. 2009 Mar-Apr;100(2):158-69. doi: 10.1093/jhered/esn093. Epub 2008 Oct 30.

PMID:
18974398
[PubMed - indexed for MEDLINE]
Free Article
14.

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery.

Stothard P, Choi JW, Basu U, Sumner-Thomson JM, Meng Y, Liao X, Moore SS.

BMC Genomics. 2011 Nov 15;12:559. doi: 10.1186/1471-2164-12-559.

PMID:
22085807
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

An initial genetic linkage map of the rhesus macaque (Macaca mulatta) genome using human microsatellite loci.

Rogers J, Garcia R, Shelledy W, Kaplan J, Arya A, Johnson Z, Bergstrom M, Novakowski L, Nair P, Vinson A, Newman D, Heckman G, Cameron J.

Genomics. 2006 Jan;87(1):30-8.

PMID:
16321502
[PubMed - indexed for MEDLINE]
Free Article
16.

Identifying human-rhesus macaque gene orthologs using heterospecific SNP probes.

Kanthaswamy S, Ng J, Ross CT, Trask JS, Smith DG, Buffalo VS, Fass JN, Lin D.

Genomics. 2013 Jan;101(1):30-7. doi: 10.1016/j.ygeno.2012.09.001. Epub 2012 Sep 12.

PMID:
22982528
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Genome-wide patterns of genetic variation in two domestic chickens.

Fan WL, Ng CS, Chen CF, Lu MY, Chen YH, Liu CJ, Wu SM, Chen CK, Chen JJ, Mao CT, Lai YT, Lo WS, Chang WH, Li WH.

Genome Biol Evol. 2013;5(7):1376-92. doi: 10.1093/gbe/evt097.

PMID:
23814129
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genome-based analysis of the nonhuman primate Macaca fascicularis as a model for drug safety assessment.

Ebeling M, Küng E, See A, Broger C, Steiner G, Berrera M, Heckel T, Iniguez L, Albert T, Schmucki R, Biller H, Singer T, Certa U.

Genome Res. 2011 Oct;21(10):1746-56. doi: 10.1101/gr.123117.111. Epub 2011 Aug 23.

PMID:
21862625
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Whole-genome sequencing and analysis of the Malaysian cynomolgus macaque (Macaca fascicularis) genome.

Higashino A, Sakate R, Kameoka Y, Takahashi I, Hirata M, Tanuma R, Masui T, Yasutomi Y, Osada N.

Genome Biol. 2012 Jul 2;13(7):R58. doi: 10.1186/gb-2012-13-7-r58.

PMID:
22747675
[PubMed - in process]
Free PMC Article
20.

The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta).

Trask JA, Malhi RS, Kanthaswamy S, Johnson J, Garnica WT, Malladi VS, Smith DG.

Primates. 2011 Apr;52(2):129-38. doi: 10.1007/s10329-010-0232-4. Epub 2011 Jan 5.

PMID:
21207104
[PubMed - indexed for MEDLINE]

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