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Results: 1 to 20 of 293

1.

Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa.

Wei LQ, Yan LF, Wang T.

Genome Biol. 2011 Jun 16;12(6):R53. doi: 10.1186/gb-2011-12-6-r53.

PMID:
21679406
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Identification and expression analysis of microRNAs at the grain filling stage in rice(Oryza sativa L.)via deep sequencing.

Yi R, Zhu Z, Hu J, Qian Q, Dai J, Ding Y.

PLoS One. 2013;8(3):e57863. doi: 10.1371/journal.pone.0057863. Epub 2013 Mar 1.

PMID:
23469249
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Identification of novel MiRNAs and MiRNA expression profiling during grain development in indica rice.

Lan Y, Su N, Shen Y, Zhang R, Wu F, Cheng Z, Wang J, Zhang X, Guo X, Lei C, Wang J, Jiang L, Mao L, Wan J.

BMC Genomics. 2012 Jun 21;13:264. doi: 10.1186/1471-2164-13-264.

PMID:
22721355
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Genome-scale analysis and comparison of gene expression profiles in developing and germinated pollen in Oryza sativa.

Wei LQ, Xu WY, Deng ZY, Su Z, Xue Y, Wang T.

BMC Genomics. 2010 May 28;11:338. doi: 10.1186/1471-2164-11-338.

PMID:
20507633
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Discovery of barley miRNAs through deep sequencing of short reads.

Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U.

BMC Genomics. 2011 Feb 25;12:129. doi: 10.1186/1471-2164-12-129.

PMID:
21352554
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

MicroRNA profiles and their control of male gametophyte development in rice.

Peng H, Chun J, Ai TB, Tong YA, Zhang R, Zhao MM, Chen F, Wang SH.

Plant Mol Biol. 2012 Sep;80(1):85-102. doi: 10.1007/s11103-012-9898-x. Epub 2012 Mar 9.

PMID:
22403030
[PubMed - indexed for MEDLINE]
7.

Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing.

Kim B, Yu HJ, Park SG, Shin JY, Oh M, Kim N, Mun JH.

BMC Plant Biol. 2012 Nov 19;12:218. doi: 10.1186/1471-2229-12-218.

PMID:
23163954
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing.

Liu H, Qin C, Chen Z, Zuo T, Yang X, Zhou H, Xu M, Cao S, Shen Y, Lin H, He X, Zhang Y, Li L, Ding H, Lübberstedt T, Zhang Z, Pan G.

BMC Genomics. 2014 Jan 14;15:25. doi: 10.1186/1471-2164-15-25.

PMID:
24422852
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains.

Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C.

Genome Res. 2008 Sep;18(9):1456-65. doi: 10.1101/gr.075572.107. Epub 2008 Aug 7.

PMID:
18687877
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response.

Zhang J, Xu Y, Huan Q, Chong K.

BMC Genomics. 2009 Sep 23;10:449. doi: 10.1186/1471-2164-10-449.

PMID:
19772667
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

Lacombe S, Nagasaki H, Santi C, Duval D, Piégu B, Bangratz M, Breitler JC, Guiderdoni E, Brugidou C, Hirsch J, Cao X, Brice C, Panaud O, Karlowski WM, Sato Y, Echeverria M.

BMC Plant Biol. 2008 Dec 2;8:123. doi: 10.1186/1471-2229-8-123.

PMID:
19055717
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing.

Shamimuzzaman M, Vodkin L.

BMC Genomics. 2012 Jul 16;13:310. doi: 10.1186/1471-2164-13-310.

PMID:
22799740
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Identification of Taxus microRNAs and their targets with high-throughput sequencing and degradome analysis.

Hao DC, Yang L, Xiao PG, Liu M.

Physiol Plant. 2012 Dec;146(4):388-403. doi: 10.1111/j.1399-3054.2012.01668.x. Epub 2012 Jul 25.

PMID:
22708792
[PubMed - indexed for MEDLINE]
14.

Identification of novel and candidate miRNAs in rice by high throughput sequencing.

Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK.

BMC Plant Biol. 2008 Feb 29;8:25. doi: 10.1186/1471-2229-8-25.

PMID:
18312648
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets.

Wang XJ, Reyes JL, Chua NH, Gaasterland T.

Genome Biol. 2004;5(9):R65. Epub 2004 Aug 31.

PMID:
15345049
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

SeqTar: an effective method for identifying microRNA guided cleavage sites from degradome of polyadenylated transcripts in plants.

Zheng Y, Li YF, Sunkar R, Zhang W.

Nucleic Acids Res. 2012 Feb;40(4):e28. doi: 10.1093/nar/gkr1092. Epub 2011 Dec 2.

PMID:
22140118
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Conservation and divergence of microRNAs in Populus.

Barakat A, Wall PK, Diloreto S, Depamphilis CW, Carlson JE.

BMC Genomics. 2007 Dec 31;8:481. doi: 10.1186/1471-2164-8-481.

PMID:
18166134
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Profiling microRNA expression in Arabidopsis pollen using microRNA array and real-time PCR.

Chambers C, Shuai B.

BMC Plant Biol. 2009 Jul 10;9:87. doi: 10.1186/1471-2229-9-87.

PMID:
19591667
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets.

Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J.

BMC Plant Biol. 2012 Feb 13;12:18. doi: 10.1186/1471-2229-12-18.

PMID:
22330773
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome.

Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM.

Hum Mol Genet. 2011 Oct 15;20(20):4025-40. doi: 10.1093/hmg/ddr331. Epub 2011 Aug 1.

PMID:
21807764
[PubMed - indexed for MEDLINE]
Free PMC Article

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