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Results: 1 to 20 of 116

1.

Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection.

Gokcumen O, Babb PL, Iskow RC, Zhu Q, Shi X, Mills RE, Ionita-Laza I, Vallender EJ, Clark AG, Johnson WE, Lee C.

Genome Biol. 2011;12(5):R52. doi: 10.1186/gb-2011-12-5-r52. Epub 2011 May 31.

PMID:
21627829
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Comparative analysis of copy number variation in primate genomes.

Kehrer-Sawatzki H, Cooper DN.

Cytogenet Genome Res. 2008;123(1-4):288-96. doi: 10.1159/000184720. Epub 2009 Mar 11.

PMID:
19287167
[PubMed - indexed for MEDLINE]
3.

Copy number variation and evolution in humans and chimpanzees.

Perry GH, Yang F, Marques-Bonet T, Murphy C, Fitzgerald T, Lee AS, Hyland C, Stone AC, Hurles ME, Tyler-Smith C, Eichler EE, Carter NP, Lee C, Redon R.

Genome Res. 2008 Nov;18(11):1698-710. doi: 10.1101/gr.082016.108. Epub 2008 Sep 4.

PMID:
18775914
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Analysis of copy number variation in the rhesus macaque genome identifies candidate loci for evolutionary and human disease studies.

Lee AS, Gutiérrez-Arcelus M, Perry GH, Vallender EJ, Johnson WE, Miller GM, Korbel JO, Lee C.

Hum Mol Genet. 2008 Apr 15;17(8):1127-36. doi: 10.1093/hmg/ddn002. Epub 2008 Jan 7.

PMID:
18180252
[PubMed - indexed for MEDLINE]
Free Article
5.

Hotspots for copy number variation in chimpanzees and humans.

Perry GH, Tchinda J, McGrath SD, Zhang J, Picker SR, Cáceres AM, Iafrate AJ, Tyler-Smith C, Scherer SW, Eichler EE, Stone AC, Lee C.

Proc Natl Acad Sci U S A. 2006 May 23;103(21):8006-11. Epub 2006 May 15.

PMID:
16702545
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Copy number variation analysis in the great apes reveals species-specific patterns of structural variation.

Gazave E, Darré F, Morcillo-Suarez C, Petit-Marty N, Carreño A, Marigorta UM, Ryder OA, Blancher A, Rocchi M, Bosch E, Baker C, Marquès-Bonet T, Eichler EE, Navarro A.

Genome Res. 2011 Oct;21(10):1626-39. doi: 10.1101/gr.117242.110. Epub 2011 Aug 8.

PMID:
21824994
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

High-resolution copy-number variation map reflects human olfactory receptor diversity and evolution.

Hasin Y, Olender T, Khen M, Gonzaga-Jauregui C, Kim PM, Urban AE, Snyder M, Gerstein MB, Lancet D, Korbel JO.

PLoS Genet. 2008 Nov;4(11):e1000249. doi: 10.1371/journal.pgen.1000249. Epub 2008 Nov 7.

PMID:
18989455
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Copy-number variation: the balance between gene dosage and expression in Drosophila melanogaster.

Zhou J, Lemos B, Dopman EB, Hartl DL.

Genome Biol Evol. 2011;3:1014-24. doi: 10.1093/gbe/evr023.

PMID:
21979154
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genomic characteristics of cattle copy number variations.

Hou Y, Liu GE, Bickhart DM, Cardone MF, Wang K, Kim ES, Matukumalli LK, Ventura M, Song J, VanRaden PM, Sonstegard TS, Van Tassell CP.

BMC Genomics. 2011 Feb 23;12:127. doi: 10.1186/1471-2164-12-127.

PMID:
21345189
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Understanding the recent evolution of the human genome: insights from human-chimpanzee genome comparisons.

Kehrer-Sawatzki H, Cooper DN.

Hum Mutat. 2007 Feb;28(2):99-130. Review.

PMID:
17024666
[PubMed - indexed for MEDLINE]
11.

CNVs-microRNAs interactions demonstrate unique characteristics in the human genome. An interspecies in silico analysis.

Dweep H, Georgiou GD, Gretz N, Deltas C, Voskarides K, Felekkis K.

PLoS One. 2013 Dec 2;8(12):e81204. doi: 10.1371/journal.pone.0081204. eCollection 2013.

PMID:
24312536
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution.

Jiang Z, Tang H, Ventura M, Cardone MF, Marques-Bonet T, She X, Pevzner PA, Eichler EE.

Nat Genet. 2007 Nov;39(11):1361-8. Epub 2007 Oct 7.

PMID:
17922013
[PubMed - indexed for MEDLINE]
13.

Comparative genomics in chicken and Pekin duck using FISH mapping and microarray analysis.

Skinner BM, Robertson LB, Tempest HG, Langley EJ, Ioannou D, Fowler KE, Crooijmans RP, Hall AD, Griffin DK, Völker M.

BMC Genomics. 2009 Aug 5;10:357. doi: 10.1186/1471-2164-10-357.

PMID:
19656363
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

High divergence in primate-specific duplicated regions: human and chimpanzee chorionic gonadotropin beta genes.

Hallast P, Saarela J, Palotie A, Laan M.

BMC Evol Biol. 2008 Jul 7;8:195. doi: 10.1186/1471-2148-8-195.

PMID:
18606016
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Global variation in copy number in the human genome.

Redon R, Ishikawa S, Fitch KR, Feuk L, Perry GH, Andrews TD, Fiegler H, Shapero MH, Carson AR, Chen W, Cho EK, Dallaire S, Freeman JL, González JR, Gratacòs M, Huang J, Kalaitzopoulos D, Komura D, MacDonald JR, Marshall CR, Mei R, Montgomery L, Nishimura K, Okamura K, Shen F, Somerville MJ, Tchinda J, Valsesia A, Woodwark C, Yang F, Zhang J, Zerjal T, Zhang J, Armengol L, Conrad DF, Estivill X, Tyler-Smith C, Carter NP, Aburatani H, Lee C, Jones KW, Scherer SW, Hurles ME.

Nature. 2006 Nov 23;444(7118):444-54.

PMID:
17122850
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Mutational and selective effects on copy-number variants in the human genome.

Cooper GM, Nickerson DA, Eichler EE.

Nat Genet. 2007 Jul;39(7 Suppl):S22-9. Review.

PMID:
17597777
[PubMed - indexed for MEDLINE]
17.

Identification of human-specific transcript variants induced by DNA insertions in the human genome.

Kim DS, Hahn Y.

Bioinformatics. 2011 Jan 1;27(1):14-21. doi: 10.1093/bioinformatics/btq612. Epub 2010 Oct 29.

PMID:
21037245
[PubMed - indexed for MEDLINE]
Free Article
18.

Copy number variation of individual cattle genomes using next-generation sequencing.

Bickhart DM, Hou Y, Schroeder SG, Alkan C, Cardone MF, Matukumalli LK, Song J, Schnabel RD, Ventura M, Taylor JF, Garcia JF, Van Tassell CP, Sonstegard TS, Eichler EE, Liu GE.

Genome Res. 2012 Apr;22(4):778-90. doi: 10.1101/gr.133967.111. Epub 2012 Feb 2.

PMID:
22300768
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Identification of large-scale human-specific copy number differences by inter-species array comparative genomic hybridization.

Goidts V, Armengol L, Schempp W, Conroy J, Nowak N, Müller S, Cooper DN, Estivill X, Enard W, Szamalek JM, Hameister H, Kehrer-Sawatzki H.

Hum Genet. 2006 Mar;119(1-2):185-98. Epub 2006 Jan 5.

PMID:
16395594
[PubMed - indexed for MEDLINE]
20.

Reduced purifying selection prevails over positive selection in human copy number variant evolution.

Nguyen DQ, Webber C, Hehir-Kwa J, Pfundt R, Veltman J, Ponting CP.

Genome Res. 2008 Nov;18(11):1711-23. doi: 10.1101/gr.077289.108. Epub 2008 Aug 7.

PMID:
18687881
[PubMed - indexed for MEDLINE]
Free PMC Article

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