Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 149

1.

A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure.

Zuccolo A, Bowers JE, Estill JC, Xiong Z, Luo M, Sebastian A, Goicoechea JL, Collura K, Yu Y, Jiao Y, Duarte J, Tang H, Ayyampalayam S, Rounsley S, Kudrna D, Paterson AH, Pires JC, Chanderbali A, Soltis DE, Chamala S, Barbazuk B, Soltis PS, Albert VA, Ma H, Mandoli D, Banks J, Carlson JE, Tomkins J, dePamphilis CW, Wing RA, Leebens-Mack J.

Genome Biol. 2011;12(5):R48. doi: 10.1186/gb-2011-12-5-r48. Epub 2011 May 27.

PMID:
21619600
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The Amborella genome and the evolution of flowering plants.

Amborella Genome Project.

Science. 2013 Dec 20;342(6165):1241089. doi: 10.1126/science.1241089.

PMID:
24357323
[PubMed - indexed for MEDLINE]
3.

Genomic tools development for Aquilegia: construction of a BAC-based physical map.

Fang GC, Blackmon BP, Henry DC, Staton ME, Saski CA, Hodges SA, Tomkins JP, Luo H.

BMC Genomics. 2010 Nov 8;11:621. doi: 10.1186/1471-2164-11-621.

PMID:
21059242
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels.

Duarte JM, Wall PK, Edger PP, Landherr LL, Ma H, Pires JC, Leebens-Mack J, dePamphilis CW.

BMC Evol Biol. 2010 Feb 24;10:61. doi: 10.1186/1471-2148-10-61.

PMID:
20181251
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Identifying the basal angiosperm node in chloroplast genome phylogenies: sampling one's way out of the Felsenstein zone.

Leebens-Mack J, Raubeson LA, Cui L, Kuehl JV, Fourcade MH, Chumley TW, Boore JL, Jansen RK, depamphilis CW.

Mol Biol Evol. 2005 Oct;22(10):1948-63. Epub 2005 Jun 8.

PMID:
15944438
[PubMed - indexed for MEDLINE]
Free Article
6.

Long branch attraction, taxon sampling, and the earliest angiosperms: Amborella or monocots?

Stefanović S, Rice DW, Palmer JD.

BMC Evol Biol. 2004 Sep 28;4:35.

PMID:
15453916
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Analysis of the Amborella trichopoda chloroplast genome sequence suggests that amborella is not a basal angiosperm.

Goremykin VV, Hirsch-Ernst KI, Wolfl S, Hellwig FH.

Mol Biol Evol. 2003 Sep;20(9):1499-505. Epub 2003 Jun 27.

PMID:
12832641
[PubMed - indexed for MEDLINE]
Free Article
8.

The complete chloroplast genome sequence of Citrus sinensis (L.) Osbeck var 'Ridge Pineapple': organization and phylogenetic relationships to other angiosperms.

Bausher MG, Singh ND, Lee SB, Jansen RK, Daniell H.

BMC Plant Biol. 2006 Sep 30;6:21.

PMID:
17010212
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Phylogenetic and evolutionary implications of complete chloroplast genome sequences of four early-diverging angiosperms: Buxus (Buxaceae), Chloranthus (Chloranthaceae), Dioscorea (Dioscoreaceae), and Illicium (Schisandraceae).

Hansen DR, Dastidar SG, Cai Z, Penaflor C, Kuehl JV, Boore JL, Jansen RK.

Mol Phylogenet Evol. 2007 Nov;45(2):547-63. Epub 2007 Jun 16.

PMID:
17644003
[PubMed - indexed for MEDLINE]
10.

The Amborella genome: an evolutionary reference for plant biology.

Soltis DE, Albert VA, Leebens-Mack J, Palmer JD, Wing RA, dePamphilis CW, Ma H, Carlson JE, Altman N, Kim S, Wall PK, Zuccolo A, Soltis PS.

Genome Biol. 2008;9(3):402. doi: 10.1186/gb-2008-9-3-402. Epub 2008 Mar 10.

PMID:
18341710
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes.

Jung S, Main D, Staton M, Cho I, Zhebentyayeva T, Arús P, Abbott A.

BMC Genomics. 2006 Apr 14;7:81.

PMID:
16615871
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids.

Jansen RK, Kaittanis C, Saski C, Lee SB, Tomkins J, Alverson AJ, Daniell H.

BMC Evol Biol. 2006 Apr 9;6:32.

PMID:
16603088
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Comparative sequence analyses indicate that Coffea (Asterids) and Vitis (Rosids) derive from the same paleo-hexaploid ancestral genome.

Cenci A, Combes MC, Lashermes P.

Mol Genet Genomics. 2010 May;283(5):493-501. doi: 10.1007/s00438-010-0534-7. Epub 2010 Apr 2.

PMID:
20361338
[PubMed - indexed for MEDLINE]
14.

Towards improved reconstruction of ancestral gene order in angiosperm phylogeny.

Sankoff D, Zheng C, Wall PK, dePamphilis C, Leebens-Mack J, Albert VA.

J Comput Biol. 2009 Oct;16(10):1353-67. doi: 10.1089/cmb.2009.0103.

PMID:
19803735
[PubMed - indexed for MEDLINE]
15.

Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes.

Guyot R, de la Mare M, Viader V, Hamon P, Coriton O, Bustamante-Porras J, Poncet V, Campa C, Hamon S, de Kochko A.

BMC Plant Biol. 2009 Feb 25;9:22. doi: 10.1186/1471-2229-9-22.

PMID:
19243618
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Another look at the root of the angiosperms reveals a familiar tale.

Drew BT, Ruhfel BR, Smith SA, Moore MJ, Briggs BG, Gitzendanner MA, Soltis PS, Soltis DE.

Syst Biol. 2014 May;63(3):368-82. doi: 10.1093/sysbio/syt108. Epub 2014 Jan 3.

PMID:
24391149
[PubMed - indexed for MEDLINE]
17.

Independent and combined analyses of sequences from all three genomic compartments converge on the root of flowering plant phylogeny.

Barkman TJ, Chenery G, McNeal JR, Lyons-Weiler J, Ellisens WJ, Moore G, Wolfe AD, dePamphilis CW.

Proc Natl Acad Sci U S A. 2000 Nov 21;97(24):13166-71.

PMID:
11069280
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Assembly and validation of the genome of the nonmodel basal angiosperm Amborella.

Chamala S, Chanderbali AS, Der JP, Lan T, Walts B, Albert VA, dePamphilis CW, Leebens-Mack J, Rounsley S, Schuster SC, Wing RA, Xiao N, Moore R, Soltis PS, Soltis DE, Barbazuk WB.

Science. 2013 Dec 20;342(6165):1516-7. doi: 10.1126/science.1241130.

PMID:
24357320
[PubMed - indexed for MEDLINE]
19.

Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella.

Bergthorsson U, Richardson AO, Young GJ, Goertzen LR, Palmer JD.

Proc Natl Acad Sci U S A. 2004 Dec 21;101(51):17747-52. Epub 2004 Dec 14.

PMID:
15598737
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Palaeohexaploid ancestry for Caryophyllales inferred from extensive gene-based physical and genetic mapping of the sugar beet genome (Beta vulgaris).

Dohm JC, Lange C, Holtgräwe D, Sörensen TR, Borchardt D, Schulz B, Lehrach H, Weisshaar B, Himmelbauer H.

Plant J. 2012 May;70(3):528-40. doi: 10.1111/j.1365-313X.2011.04898.x. Epub 2012 Feb 14. Erratum in: Plant J. 2012 Jul;71(1):182.

PMID:
22211633
[PubMed - indexed for MEDLINE]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk