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Results: 1 to 20 of 115

1.

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi.

Hane JK, Rouxel T, Howlett BJ, Kema GH, Goodwin SB, Oliver RP.

Genome Biol. 2011;12(5):R45. doi: 10.1186/gb-2011-12-5-r45. Epub 2011 May 24.

PMID:
21605470
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes.

Bhutkar A, Schaeffer SW, Russo SM, Xu M, Smith TF, Gelbart WM.

Genetics. 2008 Jul;179(3):1657-80. doi: 10.1534/genetics.107.086108. Epub 2008 Jul 13.

PMID:
18622036
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Evolutionary, structural and functional relationships revealed by comparative analysis of syntenic genes in Rhizobiales.

Guerrero G, Peralta H, Aguilar A, Díaz R, Villalobos MA, Medrano-Soto A, Mora J.

BMC Evol Biol. 2005 Oct 17;5:55.

PMID:
16229745
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms.

Sinha AU, Meller J.

BMC Bioinformatics. 2007 Mar 8;8:82.

PMID:
17343765
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Gene order and recombination rate in homologous chromosome regions of the chicken and a passerine bird.

Dawson DA, Akesson M, Burke T, Pemberton JM, Slate J, Hansson B.

Mol Biol Evol. 2007 Jul;24(7):1537-52. Epub 2007 Apr 13.

PMID:
17434902
[PubMed - indexed for MEDLINE]
Free Article
6.

Inversions and gene order shuffling in Anopheles gambiae and A. funestus.

Sharakhov IV, Serazin AC, Grushko OG, Dana A, Lobo N, Hillenmeyer ME, Westerman R, Romero-Severson J, Costantini C, Sagnon N, Collins FH, Besansky NJ.

Science. 2002 Oct 4;298(5591):182-5.

PMID:
12364797
[PubMed - indexed for MEDLINE]
Free Article
7.

Evolution of SET-domain protein families in the unicellular and multicellular Ascomycota fungi.

Veerappan CS, Avramova Z, Moriyama EN.

BMC Evol Biol. 2008 Jul 1;8:190. doi: 10.1186/1471-2148-8-190.

PMID:
18593478
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis.

Goodwin SB, M'barek SB, Dhillon B, Wittenberg AH, Crane CF, Hane JK, Foster AJ, Van der Lee TA, Grimwood J, Aerts A, Antoniw J, Bailey A, Bluhm B, Bowler J, Bristow J, van der Burgt A, Canto-Canché B, Churchill AC, Conde-Ferràez L, Cools HJ, Coutinho PM, Csukai M, Dehal P, De Wit P, Donzelli B, van de Geest HC, van Ham RC, Hammond-Kosack KE, Henrissat B, Kilian A, Kobayashi AK, Koopmann E, Kourmpetis Y, Kuzniar A, Lindquist E, Lombard V, Maliepaard C, Martins N, Mehrabi R, Nap JP, Ponomarenko A, Rudd JJ, Salamov A, Schmutz J, Schouten HJ, Shapiro H, Stergiopoulos I, Torriani SF, Tu H, de Vries RP, Waalwijk C, Ware SB, Wiebenga A, Zwiers LH, Oliver RP, Grigoriev IV, Kema GH.

PLoS Genet. 2011 Jun;7(6):e1002070. doi: 10.1371/journal.pgen.1002070. Epub 2011 Jun 9.

PMID:
21695235
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes.

Patron NJ, Waller RF, Cozijnsen AJ, Straney DC, Gardiner DM, Nierman WC, Howlett BJ.

BMC Evol Biol. 2007 Sep 26;7:174.

PMID:
17897469
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Construction of a comparative genetic map in faba bean (Vicia faba L.); conservation of genome structure with Lens culinaris.

Ellwood SR, Phan HT, Jordan M, Hane J, Torres AM, Avila CM, Cruz-Izquierdo S, Oliver RP.

BMC Genomics. 2008 Aug 9;9:380. doi: 10.1186/1471-2164-9-380.

PMID:
18691425
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Automated identification of conserved synteny after whole-genome duplication.

Catchen JM, Conery JS, Postlethwait JH.

Genome Res. 2009 Aug;19(8):1497-505. doi: 10.1101/gr.090480.108. Epub 2009 May 22.

PMID:
19465509
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Comparative genomics of ParaHox clusters of teleost fishes: gene cluster breakup and the retention of gene sets following whole genome duplications.

Siegel N, Hoegg S, Salzburger W, Braasch I, Meyer A.

BMC Genomics. 2007 Sep 6;8:312.

PMID:
17822543
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.

Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, Bussemaker HJ, van Batenburg MF, Howells SL, Scherer SE, Sodergren E, Matthews BB, Crosby MA, Schroeder AJ, Ortiz-Barrientos D, Rives CM, Metzker ML, Muzny DM, Scott G, Steffen D, Wheeler DA, Worley KC, Havlak P, Durbin KJ, Egan A, Gill R, Hume J, Morgan MB, Miner G, Hamilton C, Huang Y, Waldron L, Verduzco D, Clerc-Blankenburg KP, Dubchak I, Noor MA, Anderson W, White KP, Clark AG, Schaeffer SW, Gelbart W, Weinstock GM, Gibbs RA.

Genome Res. 2005 Jan;15(1):1-18.

PMID:
15632085
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Techniques for multi-genome synteny analysis to overcome assembly limitations.

Bhutkar A, Russo S, Smith TF, Gelbart WM.

Genome Inform. 2006;17(2):152-61.

PMID:
17503388
[PubMed - indexed for MEDLINE]
15.

Genomic exploration of the hemiascomycetous yeasts: 18. Comparative analysis of chromosome maps and synteny with Saccharomyces cerevisiae.

Llorente B, Malpertuy A, Neuvéglise C, de Montigny J, Aigle M, Artiguenave F, Blandin G, Bolotin-Fukuhara M, Bon E, Brottier P, Casaregola S, Durrens P, Gaillardin C, Lépingle A, Ozier-Kalogéropoulos O, Potier S, Saurin W, Tekaia F, Toffano-Nioche C, Wésolowski-Louvel M, Wincker P, Weissenbach J, Souciet J, Dujon B.

FEBS Lett. 2000 Dec 22;487(1):101-12.

PMID:
11152893
[PubMed - indexed for MEDLINE]
Free Article
16.

Comparative genomics and evolution of conserved noncoding elements (CNE) in rainbow trout.

Moghadam HK, Ferguson MM, Danzmann RG.

BMC Genomics. 2009 Jun 23;10:278. doi: 10.1186/1471-2164-10-278.

PMID:
19549339
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

[Comparison of genomes between Aspergillus nidulans and 30 filamentous ascomycetes].

Zeng ZQ, Zhao FY, Hsiang T, Yu ZH.

Yi Chuan. 2010 Nov;32(11):1195-202. Chinese.

PMID:
21513172
[PubMed - indexed for MEDLINE]
18.

The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae.

Thon MR, Pan H, Diener S, Papalas J, Taro A, Mitchell TK, Dean RA.

Genome Biol. 2006;7(2):R16. Epub 2006 Feb 28.

PMID:
16507177
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Gene synteny comparisons between different vertebrates provide new insights into breakage and fusion events during mammalian karyotype evolution.

Kemkemer C, Kohn M, Cooper DN, Froenicke L, Högel J, Hameister H, Kehrer-Sawatzki H.

BMC Evol Biol. 2009 Apr 24;9:84. doi: 10.1186/1471-2148-9-84.

PMID:
19393055
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Arm-specific dynamics of chromosome evolution in malaria mosquitoes.

Sharakhova MV, Xia A, Leman SC, Sharakhov IV.

BMC Evol Biol. 2011 Apr 7;11:91. doi: 10.1186/1471-2148-11-91.

PMID:
21473772
[PubMed - indexed for MEDLINE]
Free PMC Article

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