Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 99

1.

Dynamic reprogramming of chromatin accessibility during Drosophila embryo development.

Thomas S, Li XY, Sabo PJ, Sandstrom R, Thurman RE, Canfield TK, Giste E, Fisher W, Hammonds A, Celniker SE, Biggin MD, Stamatoyannopoulos JA.

Genome Biol. 2011;12(5):R43. doi: 10.1186/gb-2011-12-5-r43. Epub 2011 May 11.

PMID:
21569360
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Temporal coordination of gene networks by Zelda in the early Drosophila embryo.

Nien CY, Liang HL, Butcher S, Sun Y, Fu S, Gocha T, Kirov N, Manak JR, Rushlow C.

PLoS Genet. 2011 Oct;7(10):e1002339. doi: 10.1371/journal.pgen.1002339. Epub 2011 Oct 20.

PMID:
22028675
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions.

MacArthur S, Li XY, Li J, Brown JB, Chu HC, Zeng L, Grondona BP, Hechmer A, Simirenko L, Keränen SV, Knowles DW, Stapleton M, Bickel P, Biggin MD, Eisen MB.

Genome Biol. 2009;10(7):R80. doi: 10.1186/gb-2009-10-7-r80. Epub 2009 Jul 23.

PMID:
19627575
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Zelda binding in the early Drosophila melanogaster embryo marks regions subsequently activated at the maternal-to-zygotic transition.

Harrison MM, Li XY, Kaplan T, Botchan MR, Eisen MB.

PLoS Genet. 2011 Oct;7(10):e1002266. doi: 10.1371/journal.pgen.1002266. Epub 2011 Oct 20.

PMID:
22028662
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The even-skipped locus is contained in a 16-kb chromatin domain.

Sackerson C, Fujioka M, Goto T.

Dev Biol. 1999 Jul 1;211(1):39-52.

PMID:
10373303
[PubMed - indexed for MEDLINE]
Free Article
6.

The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding.

Li XY, Thomas S, Sabo PJ, Eisen MB, Stamatoyannopoulos JA, Biggin MD.

Genome Biol. 2011;12(4):R34. doi: 10.1186/gb-2011-12-4-r34. Epub 2011 Apr 7.

PMID:
21473766
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The zinc-finger protein Zelda is a key activator of the early zygotic genome in Drosophila.

Liang HL, Nien CY, Liu HY, Metzstein MM, Kirov N, Rushlow C.

Nature. 2008 Nov 20;456(7220):400-3. doi: 10.1038/nature07388. Epub 2008 Oct 19.

PMID:
18931655
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Quantitative models of the mechanisms that control genome-wide patterns of transcription factor binding during early Drosophila development.

Kaplan T, Li XY, Sabo PJ, Thomas S, Stamatoyannopoulos JA, Biggin MD, Eisen MB.

PLoS Genet. 2011 Feb 3;7(2):e1001290. doi: 10.1371/journal.pgen.1001290.

PMID:
21304941
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome-wide analysis of the binding of the Hox protein Ultrabithorax and the Hox cofactor Homothorax in Drosophila.

Choo SW, White R, Russell S.

PLoS One. 2011 Apr 5;6(4):e14778. doi: 10.1371/journal.pone.0014778.

PMID:
21483667
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.

Kharchenko PV, Alekseyenko AA, Schwartz YB, Minoda A, Riddle NC, Ernst J, Sabo PJ, Larschan E, Gorchakov AA, Gu T, Linder-Basso D, Plachetka A, Shanower G, Tolstorukov MY, Luquette LJ, Xi R, Jung YL, Park RW, Bishop EP, Canfield TK, Sandstrom R, Thurman RE, MacAlpine DM, Stamatoyannopoulos JA, Kellis M, Elgin SC, Kuroda MI, Pirrotta V, Karpen GH, Park PJ.

Nature. 2011 Mar 24;471(7339):480-5. doi: 10.1038/nature09725. Epub 2010 Dec 22.

PMID:
21179089
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Shadow enhancers as a source of evolutionary novelty.

Hong JW, Hendrix DA, Levine MS.

Science. 2008 Sep 5;321(5894):1314. doi: 10.1126/science.1160631. No abstract available.

PMID:
18772429
[PubMed - indexed for MEDLINE]
Free Article
12.

Genes encoding novel secreted and transmembrane proteins are temporally and spatially regulated during Drosophila melanogaster embryogenesis.

Zúñiga A, Hödar C, Hanna P, Ibáñez F, Moreno P, Pulgar R, Pastenes L, González M, Cambiazo V.

BMC Biol. 2009 Sep 22;7:61. doi: 10.1186/1741-7007-7-61.

PMID:
19772636
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Akirin links twist-regulated transcription with the Brahma chromatin remodeling complex during embryogenesis.

Nowak SJ, Aihara H, Gonzalez K, Nibu Y, Baylies MK.

PLoS Genet. 2012;8(3):e1002547. doi: 10.1371/journal.pgen.1002547. Epub 2012 Mar 1.

PMID:
22396663
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Whole-genome ChIP-chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the Drosophila embryo.

Zeitlinger J, Zinzen RP, Stark A, Kellis M, Zhang H, Young RA, Levine M.

Genes Dev. 2007 Feb 15;21(4):385-90.

PMID:
17322397
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Molecular biology: A fly in the face of genomics.

Furlong EE.

Nature. 2011 Mar 24;471(7339):458-9. doi: 10.1038/471458a. No abstract available.

PMID:
21430772
[PubMed - indexed for MEDLINE]
16.

The pleiohomeotic functions as a negative regulator of Drosophila even-skipped gene during embryogenesis.

Kim SN, Shim HP, Jeon BN, Choi WI, Hur MW, Girton JR, Kim SH, Jeon SH.

Mol Cells. 2011 Dec;32(6):549-54. doi: 10.1007/s10059-011-0173-9. Epub 2011 Nov 9.

PMID:
22080372
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Identification of functional elements and regulatory circuits by Drosophila modENCODE.

modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M.

Science. 2010 Dec 24;330(6012):1787-97. doi: 10.1126/science.1198374. Epub 2010 Dec 22.

PMID:
21177974
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The TAGteam motif facilitates binding of 21 sequence-specific transcription factors in the Drosophila embryo.

Satija R, Bradley RK.

Genome Res. 2012 Apr;22(4):656-65. doi: 10.1101/gr.130682.111. Epub 2012 Jan 13.

PMID:
22247430
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Spatial bistability generates hunchback expression sharpness in the Drosophila embryo.

Lopes FJ, Vieira FM, Holloway DM, Bisch PM, Spirov AV.

PLoS Comput Biol. 2008 Sep 26;4(9):e1000184. doi: 10.1371/journal.pcbi.1000184.

PMID:
18818726
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk