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Results: 1 to 20 of 99

1.

Characterization of DXZ4 conservation in primates implies important functional roles for CTCF binding, array expression and tandem repeat organization on the X chromosome.

McLaughlin CR, Chadwick BP.

Genome Biol. 2011;12(4):R37. doi: 10.1186/gb-2011-12-4-r37. Epub 2011 Apr 13.

PMID:
21489251
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts.

Chadwick BP.

Genome Res. 2008 Aug;18(8):1259-69. doi: 10.1101/gr.075713.107. Epub 2008 May 2.

PMID:
18456864
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The macrosatellite DXZ4 mediates CTCF-dependent long-range intrachromosomal interactions on the human inactive X chromosome.

Horakova AH, Moseley SC, McLaughlin CR, Tremblay DC, Chadwick BP.

Hum Mol Genet. 2012 Oct 15;21(20):4367-77. Epub 2012 Jul 12.

PMID:
22791747
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The mouse DXZ4 homolog retains Ctcf binding and proximity to Pls3 despite substantial organizational differences compared to the primate macrosatellite.

Horakova AH, Calabrese JM, McLaughlin CR, Tremblay DC, Magnuson T, Chadwick BP.

Genome Biol. 2012 Aug 20;13(8):R70. doi: 10.1186/gb-2012-13-8-r70.

PMID:
22906166
[PubMed - in process]
Free PMC Article
5.

YY1 associates with the macrosatellite DXZ4 on the inactive X chromosome and binds with CTCF to a hypomethylated form in some male carcinomas.

Moseley SC, Rizkallah R, Tremblay DC, Anderson BR, Hurt MM, Chadwick BP.

Nucleic Acids Res. 2012 Feb;40(4):1596-608. doi: 10.1093/nar/gkr964. Epub 2011 Nov 7.

PMID:
22064860
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Variation in array size, monomer composition and expression of the macrosatellite DXZ4.

Tremblay DC, Moseley S, Chadwick BP.

PLoS One. 2011 Apr 22;6(4):e18969. doi: 10.1371/journal.pone.0018969.

PMID:
21544201
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Familial cases of point mutations in the XIST promoter reveal a correlation between CTCF binding and pre-emptive choices of X chromosome inactivation.

Pugacheva EM, Tiwari VK, Abdullaev Z, Vostrov AA, Flanagan PT, Quitschke WW, Loukinov DI, Ohlsson R, Lobanenkov VV.

Hum Mol Genet. 2005 Apr 1;14(7):953-65. Epub 2005 Feb 24.

PMID:
15731119
[PubMed - indexed for MEDLINE]
Free Article
8.

A novel tRNA variable number tandem repeat at human chromosome 1q23.3 is implicated as a boundary element based on conservation of a CTCF motif in mouse.

Darrow EM, Chadwick BP.

Nucleic Acids Res. 2014;42(10):6421-35. doi: 10.1093/nar/gku280. Epub 2014 Apr 21.

PMID:
24753417
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development.

Filippova GN, Cheng MK, Moore JM, Truong JP, Hu YJ, Nguyen DK, Tsuchiya KD, Disteche CM.

Dev Cell. 2005 Jan;8(1):31-42.

PMID:
15669143
[PubMed - indexed for MEDLINE]
10.

The assembly and maintenance of heterochromatin initiated by transgene repeats are independent of the RNA interference pathway in mammalian cells.

Wang F, Koyama N, Nishida H, Haraguchi T, Reith W, Tsukamoto T.

Mol Cell Biol. 2006 Jun;26(11):4028-40.

PMID:
16705157
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

An enigmatic satellite.

Amos W.

Genome Biol. 2011;12(4):110. doi: 10.1186/gb-2011-12-4-110. Epub 2011 Apr 13.

PMID:
21489319
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Euchromatin islands in large heterochromatin domains are enriched for CTCF binding and differentially DNA-methylated regions.

Wen B, Wu H, Loh YH, Briem E, Daley GQ, Feinberg AP.

BMC Genomics. 2012 Oct 26;13:566. doi: 10.1186/1471-2164-13-566.

PMID:
23102236
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Analysis of the organisation and localisation of the FSHD-associated tandem array in primates: implications for the origin and evolution of the 3.3 kb repeat family.

Clark LN, Koehler U, Ward DC, Wienberg J, Hewitt JE.

Chromosoma. 1996 Sep;105(3):180-9.

PMID:
8781186
[PubMed - indexed for MEDLINE]
14.

Chromatin of the Barr body: histone and non-histone proteins associated with or excluded from the inactive X chromosome.

Chadwick BP, Willard HF.

Hum Mol Genet. 2003 Sep 1;12(17):2167-78. Epub 2003 Jul 15.

PMID:
12915472
[PubMed - indexed for MEDLINE]
Free Article
15.

A 1.5 kb repeat sequence flanks the suppressor of forked gene at the euchromatin-heterochromatin boundary of the Drosophila melanogaster X chromosome.

Tudor M, Mitchelson A, O'Hare K.

Genet Res. 1996 Dec;68(3):191-202.

PMID:
9062076
[PubMed - indexed for MEDLINE]
16.

A 5.9-kb tandem repeat at the euchromatin-heterochromatin boundary of the X chromosome of Drosophila melanogaster.

O'Hare K, Chadwick BP, Constantinou A, Davis AJ, Mitchelson A, Tudor M.

Mol Genet Genomics. 2002 Jul;267(5):647-55. Epub 2002 Jun 18.

PMID:
12172804
[PubMed - indexed for MEDLINE]
17.

Localization of human midisatellite and macrosatellite DNA sequences on chromosomes 1 and X in the great apes.

Samonte RV, Conte RA, Verma RS.

J Hum Genet. 1999;44(1):57-9.

PMID:
9929980
[PubMed - indexed for MEDLINE]
18.

CTCF, a candidate trans-acting factor for X-inactivation choice.

Chao W, Huynh KD, Spencer RJ, Davidow LS, Lee JT.

Science. 2002 Jan 11;295(5553):345-7. Epub 2001 Dec 6.

PMID:
11743158
[PubMed - indexed for MEDLINE]
Free Article
19.

Reciprocal binding of CTCF and BORIS to the NY-ESO-1 promoter coincides with derepression of this cancer-testis gene in lung cancer cells.

Hong JA, Kang Y, Abdullaev Z, Flanagan PT, Pack SD, Fischette MR, Adnani MT, Loukinov DI, Vatolin S, Risinger JI, Custer M, Chen GA, Zhao M, Nguyen DM, Barrett JC, Lobanenkov VV, Schrump DS.

Cancer Res. 2005 Sep 1;65(17):7763-74.

PMID:
16140944
[PubMed - indexed for MEDLINE]
Free Article
20.

Expression, tandem repeat copy number variation and stability of four macrosatellite arrays in the human genome.

Tremblay DC, Alexander G Jr, Moseley S, Chadwick BP.

BMC Genomics. 2010 Nov 15;11:632. doi: 10.1186/1471-2164-11-632.

PMID:
21078170
[PubMed - indexed for MEDLINE]
Free PMC Article

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