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Results: 1 to 20 of 101

1.

Closure of the NCBI SRA and implications for the long-term future of genomics data storage.

Lipman D, Flicek P, Salzberg S, Gerstein M, Knight R.

Genome Biol. 2011;12(3):402. doi: 10.1186/gb-2011-12-3-402. Epub 2011 Mar 22. No abstract available.

PMID:
21418618
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Archiving next generation sequencing data.

Shumway M, Cochrane G, Sugawara H.

Nucleic Acids Res. 2010 Jan;38(Database issue):D870-1. doi: 10.1093/nar/gkp1078. Epub 2009 Dec 3.

PMID:
19965774
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The NCBI BioSystems database.

Geer LY, Marchler-Bauer A, Geer RC, Han L, He J, He S, Liu C, Shi W, Bryant SH.

Nucleic Acids Res. 2010 Jan;38(Database issue):D492-6. doi: 10.1093/nar/gkp858. Epub 2009 Oct 23.

PMID:
19854944
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Entrez Gene: gene-centered information at NCBI.

Maglott D, Ostell J, Pruitt KD, Tatusova T.

Nucleic Acids Res. 2011 Jan;39(Database issue):D52-7. doi: 10.1093/nar/gkq1237. Epub 2010 Nov 28.

PMID:
21115458
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Using the NCBI map viewer to browse genomic sequence data.

Wolfsberg TG.

Curr Protoc Bioinformatics. 2010 Mar;Chapter 1:Unit 1.5.1-25. doi: 10.1002/0471250953.bi0105s29.

PMID:
20205186
[PubMed - indexed for MEDLINE]
6.

Database resources of the National Center for Biotechnology Information.

NCBI Resource Coordinators.

Nucleic Acids Res. 2013 Jan;41(Database issue):D8-D20. doi: 10.1093/nar/gks1189. Epub 2012 Nov 27.

PMID:
23193264
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Entrez Gene: gene-centered information at NCBI.

Maglott D, Ostell J, Pruitt KD, Tatusova T.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D54-8.

PMID:
15608257
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Entrez Gene: gene-centered information at NCBI.

Maglott D, Ostell J, Pruitt KD, Tatusova T.

Nucleic Acids Res. 2007 Jan;35(Database issue):D26-31. Epub 2006 Dec 5.

PMID:
17148475
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Database resources of the National Center for Biotechnology Information.

Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, Geer LY, Kapustin Y, Khovayko O, Landsman D, Lipman DJ, Madden TL, Maglott DR, Ostell J, Miller V, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Sirotkin K, Souvorov A, Starchenko G, Tatusov RL, Tatusova TA, Wagner L, Yaschenko E.

Nucleic Acids Res. 2007 Jan;35(Database issue):D5-12. Epub 2006 Dec 14.

PMID:
17170002
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Database resources of the National Center for Biotechnology Information.

Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, Dicuccio M, Edgar R, Federhen S, Feolo M, Geer LY, Helmberg W, Kapustin Y, Khovayko O, Landsman D, Lipman DJ, Madden TL, Maglott DR, Miller V, Ostell J, Pruitt KD, Schuler GD, Shumway M, Sequeira E, Sherry ST, Sirotkin K, Souvorov A, Starchenko G, Tatusov RL, Tatusova TA, Wagner L, Yaschenko E.

Nucleic Acids Res. 2008 Jan;36(Database issue):D13-21. Epub 2007 Nov 27.

PMID:
18045790
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.

Pruitt KD, Tatusova T, Maglott DR.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D501-4.

PMID:
15608248
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Database resources of the National Center for Biotechnology Information.

Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, Geer LY, Helmberg W, Kapustin Y, Kenton DL, Khovayko O, Lipman DJ, Madden TL, Maglott DR, Ostell J, Pruitt KD, Schuler GD, Schriml LM, Sequeira E, Sherry ST, Sirotkin K, Souvorov A, Starchenko G, Suzek TO, Tatusov R, Tatusova TA, Wagner L, Yaschenko E.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D173-80.

PMID:
16381840
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Database resources of the National Center for Biotechnology Information.

Sayers EW, Barrett T, Benson DA, Bolton E, Bryant SH, Canese K, Chetvernin V, Church DM, Dicuccio M, Federhen S, Feolo M, Fingerman IM, Geer LY, Helmberg W, Kapustin Y, Krasnov S, Landsman D, Lipman DJ, Lu Z, Madden TL, Madej T, Maglott DR, Marchler-Bauer A, Miller V, Karsch-Mizrachi I, Ostell J, Panchenko A, Phan L, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Slotta D, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Wang Y, Wilbur WJ, Yaschenko E, Ye J.

Nucleic Acids Res. 2012 Jan;40(Database issue):D13-25. doi: 10.1093/nar/gkr1184. Epub 2011 Dec 2.

PMID:
22140104
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Database resources of the National Center for Biotechnology Information.

Sayers EW, Barrett T, Benson DA, Bolton E, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Federhen S, Feolo M, Fingerman IM, Geer LY, Helmberg W, Kapustin Y, Landsman D, Lipman DJ, Lu Z, Madden TL, Madej T, Maglott DR, Marchler-Bauer A, Miller V, Mizrachi I, Ostell J, Panchenko A, Phan L, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Slotta D, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Wang Y, Wilbur WJ, Yaschenko E, Ye J.

Nucleic Acids Res. 2011 Jan;39(Database issue):D38-51. doi: 10.1093/nar/gkq1172. Epub 2010 Nov 21.

PMID:
21097890
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Gene symbol precision.

Bennani-Baiti B, Bennani-Baiti IM.

Gene. 2012 Jan 10;491(2):103-9. doi: 10.1016/j.gene.2011.09.035. Epub 2011 Oct 12. Review.

PMID:
22019431
[PubMed - indexed for MEDLINE]
16.

Database resources of the National Center for Biotechnology Information.

Sayers EW, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, Feolo M, Geer LY, Helmberg W, Kapustin Y, Landsman D, Lipman DJ, Madden TL, Maglott DR, Miller V, Mizrachi I, Ostell J, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Yaschenko E, Ye J.

Nucleic Acids Res. 2009 Jan;37(Database issue):D5-15. doi: 10.1093/nar/gkn741. Epub 2008 Oct 21. Erratum in: Nucleic Acids Res. 2009 May;37(9):3124.

PMID:
18940862
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Database resources of the National Center for Biotechnology Information.

Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Church DM, DiCuccio M, Edgar R, Federhen S, Helmberg W, Kenton DL, Khovayko O, Lipman DJ, Madden TL, Maglott DR, Ostell J, Pontius JU, Pruitt KD, Schuler GD, Schriml LM, Sequeira E, Sherry ST, Sirotkin K, Starchenko G, Suzek TO, Tatusov R, Tatusova TA, Wagner L, Yaschenko E.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D39-45.

PMID:
15608222
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

NCBI BLAST: a better web interface.

Johnson M, Zaretskaya I, Raytselis Y, Merezhuk Y, McGinnis S, Madden TL.

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W5-9. doi: 10.1093/nar/gkn201. Epub 2008 Apr 24.

PMID:
18440982
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The NCBI dbGaP database of genotypes and phenotypes.

Mailman MD, Feolo M, Jin Y, Kimura M, Tryka K, Bagoutdinov R, Hao L, Kiang A, Paschall J, Phan L, Popova N, Pretel S, Ziyabari L, Lee M, Shao Y, Wang ZY, Sirotkin K, Ward M, Kholodov M, Zbicz K, Beck J, Kimelman M, Shevelev S, Preuss D, Yaschenko E, Graeff A, Ostell J, Sherry ST.

Nat Genet. 2007 Oct;39(10):1181-6.

PMID:
17898773
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Searching NCBI databases using Entrez.

Gibney G, Baxevanis AD.

Curr Protoc Bioinformatics. 2011 Jun;Chapter 1:Unit 1.3. doi: 10.1002/0471250953.bi0103s34.

PMID:
21633942
[PubMed - indexed for MEDLINE]

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