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Results: 1 to 20 of 125

1.

The role of codon selection in regulation of translation efficiency deduced from synthetic libraries.

Navon S, Pilpel Y.

Genome Biol. 2011;12(2):R12. doi: 10.1186/gb-2011-12-2-r12. Epub 2011 Feb 1.

PMID:
21284851
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Codon-specific and general inhibition of protein synthesis by the tRNA-sequestering minigenes.

Delgado-Olivares L, Zamora-Romo E, Guarneros G, Hernandez-Sanchez J.

Biochimie. 2006 Jul;88(7):793-800. Epub 2006 Feb 3.

PMID:
16488066
[PubMed - indexed for MEDLINE]
3.

The imprint of codons on protein structure.

Deane CM, Saunders R.

Biotechnol J. 2011 Jun;6(6):641-9. doi: 10.1002/biot.201000329. Epub 2011 May 13. Review.

PMID:
21567957
[PubMed - indexed for MEDLINE]
4.

Balanced codon usage optimizes eukaryotic translational efficiency.

Qian W, Yang JR, Pearson NM, Maclean C, Zhang J.

PLoS Genet. 2012;8(3):e1002603. doi: 10.1371/journal.pgen.1002603. Epub 2012 Mar 29.

PMID:
22479199
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Increased ribosomal accuracy increases a programmed translational frameshift in Escherichia coli.

Sipley J, Goldman E.

Proc Natl Acad Sci U S A. 1993 Mar 15;90(6):2315-9.

PMID:
8460140
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Speeding with control: codon usage, tRNAs, and ribosomes.

Novoa EM, Ribas de Pouplana L.

Trends Genet. 2012 Nov;28(11):574-81. doi: 10.1016/j.tig.2012.07.006. Epub 2012 Aug 23. Review.

PMID:
22921354
[PubMed - indexed for MEDLINE]
7.

Translation rates of individual codons are not correlated with tRNA abundances or with frequencies of utilization in Escherichia coli.

Bonekamp F, Dalbøge H, Christensen T, Jensen KF.

J Bacteriol. 1989 Nov;171(11):5812-6.

PMID:
2509420
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Optimizing scaleup yield for protein production: Computationally Optimized DNA Assembly (CODA) and Translation Engineering.

Hatfield GW, Roth DA.

Biotechnol Annu Rev. 2007;13:27-42. Review.

PMID:
17875472
[PubMed - indexed for MEDLINE]
9.

Ribosome collisions and translation efficiency: optimization by codon usage and mRNA destabilization.

Mitarai N, Sneppen K, Pedersen S.

J Mol Biol. 2008 Sep 26;382(1):236-45. doi: 10.1016/j.jmb.2008.06.068. Epub 2008 Jul 1.

PMID:
18619977
[PubMed - indexed for MEDLINE]
10.

A role for codon order in translation dynamics.

Cannarozzi G, Schraudolph NN, Faty M, von Rohr P, Friberg MT, Roth AC, Gonnet P, Gonnet G, Barral Y.

Cell. 2010 Apr 16;141(2):355-67. doi: 10.1016/j.cell.2010.02.036. Erratum in: Cell. 2010 May 14;141(4):728. Cannarrozzi, Gina [corrected to Cannarozzi, Gina].

PMID:
20403329
[PubMed - indexed for MEDLINE]
Free Article
11.

Directed evolution study unveiling key sequence factors that affect translation efficiency in Escherichia coli.

Tsukuda M, Miyazaki K.

J Biosci Bioeng. 2013 Nov;116(5):540-5. doi: 10.1016/j.jbiosc.2013.05.013. Epub 2013 Jun 18.

PMID:
23790548
[PubMed - indexed for MEDLINE]
12.
13.

Coevolution of codon usage and transfer RNA abundance.

Bulmer M.

Nature. 1987 Feb 19-25;325(6106):728-30.

PMID:
2434856
[PubMed - indexed for MEDLINE]
14.

Codon optimization reveals critical factors for high level expression of two rare codon genes in Escherichia coli: RNA stability and secondary structure but not tRNA abundance.

Wu X, Jörnvall H, Berndt KD, Oppermann U.

Biochem Biophys Res Commun. 2004 Jan 2;313(1):89-96.

PMID:
14672702
[PubMed - indexed for MEDLINE]
15.

Efficient translation initiation dictates codon usage at gene start.

Bentele K, Saffert P, Rauscher R, Ignatova Z, Blüthgen N.

Mol Syst Biol. 2013 Jun 18;9:675. doi: 10.1038/msb.2013.32.

PMID:
23774758
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The effect of ribosomal protein S1 from Escherichia coli and Micrococcus luteus on protein synthesis in vitro by E. coli and Bacillus subtilis.

Farwell MA, Roberts MW, Rabinowitz JC.

Mol Microbiol. 1992 Nov;6(22):3375-83.

PMID:
1283001
[PubMed - indexed for MEDLINE]
17.

On ribosome load, codon bias and protein abundance.

Klumpp S, Dong J, Hwa T.

PLoS One. 2012;7(11):e48542. doi: 10.1371/journal.pone.0048542. Epub 2012 Nov 7.

PMID:
23144899
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Effects of consecutive AGG codons on translation in Escherichia coli, demonstrated with a versatile codon test system.

Rosenberg AH, Goldman E, Dunn JJ, Studier FW, Zubay G.

J Bacteriol. 1993 Feb;175(3):716-22.

PMID:
7678594
[PubMed - indexed for MEDLINE]
Free PMC Article
19.
20.

tRNA hopping: effects of mutant tRNAs.

O'Connor M.

Biochim Biophys Acta. 2003 Oct 20;1630(1):41-6.

PMID:
14580678
[PubMed - indexed for MEDLINE]
Free Article

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