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Results: 1 to 20 of 95

1.

Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition.

Adey A, Morrison HG, Asan, Xun X, Kitzman JO, Turner EH, Stackhouse B, MacKenzie AP, Caruccio NC, Zhang X, Shendure J.

Genome Biol. 2010;11(12):R119. doi: 10.1186/gb-2010-11-12-r119. Epub 2010 Dec 8.

PMID:
21143862
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA.

Marine R, Polson SW, Ravel J, Hatfull G, Russell D, Sullivan M, Syed F, Dumas M, Wommack KE.

Appl Environ Microbiol. 2011 Nov;77(22):8071-9. doi: 10.1128/AEM.05610-11. Epub 2011 Sep 23.

PMID:
21948828
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Ultra-low-input, tagmentation-based whole-genome bisulfite sequencing.

Adey A, Shendure J.

Genome Res. 2012 Jun;22(6):1139-43. doi: 10.1101/gr.136242.111. Epub 2012 Mar 30.

PMID:
22466172
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Adaptor-based uracil DNA glycosylase cloning simplifies shotgun library construction for large-scale sequencing.

Andersson B, Povinelli CM, Wentland MA, Shen Y, Muzny DM, Gibbs RA.

Anal Biochem. 1994 May 1;218(2):300-8.

PMID:
8074284
[PubMed - indexed for MEDLINE]
5.

Digital PCR provides sensitive and absolute calibration for high throughput sequencing.

White RA 3rd, Blainey PC, Fan HC, Quake SR.

BMC Genomics. 2009 Mar 19;10:116. doi: 10.1186/1471-2164-10-116. Erratum in: BMC Genomics. 2009;10:541.

PMID:
19298667
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Preparation of genome-wide DNA fragment libraries using bisulfite in polyacrylamide gel electrophoresis slices with formamide denaturation and quality control for massively parallel sequencing by oligonucleotide ligation and detection.

Ranade SS, Chung CB, Zon G, Boyd VL.

Anal Biochem. 2009 Jul 15;390(2):126-35. doi: 10.1016/j.ab.2009.04.020. Epub 2009 Apr 18.

PMID:
19379703
[PubMed - indexed for MEDLINE]
7.

Preparation of next-generation sequencing libraries using Nexteraâ„¢ technology: simultaneous DNA fragmentation and adaptor tagging by in vitro transposition.

Caruccio N.

Methods Mol Biol. 2011;733:241-55. doi: 10.1007/978-1-61779-089-8_17.

PMID:
21431775
[PubMed - indexed for MEDLINE]
8.

Preparation of a phage DNA fragment library for whole genome shotgun sequencing.

Summer EJ.

Methods Mol Biol. 2009;502:27-46. doi: 10.1007/978-1-60327-565-1_4.

PMID:
19082550
[PubMed - indexed for MEDLINE]
9.

[Establishment of target genomic DNA capturing system for next generation sequencing].

Chen D, Zhang W, Zhu ZD, Huang Y, Wang P, Zhou BB, Yang XN, Xiao HS, Zhang QH.

Yi Chuan. 2010 Dec;32(12):1296-303. Chinese.

PMID:
21513157
[PubMed - indexed for MEDLINE]
10.

Multiplexed Illumina sequencing libraries from picogram quantities of DNA.

Bowman SK, Simon MD, Deaton AM, Tolstorukov M, Borowsky ML, Kingston RE.

BMC Genomics. 2013 Jul 9;14:466. doi: 10.1186/1471-2164-14-466.

PMID:
23837789
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Bisulfite Patch PCR enables multiplexed sequencing of promoter methylation across cancer samples.

Varley KE, Mitra RD.

Genome Res. 2010 Sep;20(9):1279-87. doi: 10.1101/gr.101212.109. Epub 2010 Jul 13.

PMID:
20627893
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Illumina sequencing library preparation for highly multiplexed target capture and sequencing.

Meyer M, Kircher M.

Cold Spring Harb Protoc. 2010 Jun;2010(6):pdb.prot5448. doi: 10.1101/pdb.prot5448.

PMID:
20516186
[PubMed - indexed for MEDLINE]
13.

A "double adaptor" method for improved shotgun library construction.

Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA.

Anal Biochem. 1996 Apr 5;236(1):107-13.

PMID:
8619474
[PubMed - indexed for MEDLINE]
14.

Rapid PCR-based characterization of sequences flanking microsatellites in large-insert libraries.

Rothuizen J, van Raak M.

Nucleic Acids Res. 1994 Dec 11;22(24):5512-3. No abstract available.

PMID:
7816648
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Construction of bacterial artificial chromosome libraries from the parasitic nematode Brugia malayi and physical mapping of the genome of its Wolbachia endosymbiont.

Foster JM, Kumar S, Ganatra MB, Kamal IH, Ware J, Ingram J, Pope-Chappell J, Guiliano D, Whitton C, Daub J, Blaxter ML, Slatko BE.

Int J Parasitol. 2004 May;34(6):733-46.

PMID:
15111095
[PubMed - indexed for MEDLINE]
16.

Random PCR-based genome sequencing: a non-divide-and-conquer strategy.

Nishigaki K, Akasaka K, Hasegawa A.

DNA Res. 2000 Feb 28;7(1):19-26.

PMID:
10718195
[PubMed - indexed for MEDLINE]
Free Article
17.

Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing.

Teer JK, Bonnycastle LL, Chines PS, Hansen NF, Aoyama N, Swift AJ, Abaan HO, Albert TJ; NISC Comparative Sequencing Program, Margulies EH, Green ED, Collins FS, Mullikin JC, Biesecker LG.

Genome Res. 2010 Oct;20(10):1420-31. doi: 10.1101/gr.106716.110. Epub 2010 Sep 1.

PMID:
20810667
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Creation and application of immortalized bait libraries for targeted enrichment and next-generation sequencing.

Querfurth R, Fischer A, Schweiger MR, Lehrach H, Mertes F.

Biotechniques. 2012 Jun;52(6):375-80. doi: 10.2144/0000113877.

PMID:
22668416
[PubMed - indexed for MEDLINE]
Free Article
19.

ChIP sequencing to identify p53 targets.

Vaughan C, Windle B, Deb S.

Methods Mol Biol. 2013;962:227-36. doi: 10.1007/978-1-62703-236-0_19.

PMID:
23150451
[PubMed - indexed for MEDLINE]
20.

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.

Aird D, Ross MG, Chen WS, Danielsson M, Fennell T, Russ C, Jaffe DB, Nusbaum C, Gnirke A.

Genome Biol. 2011;12(2):R18. doi: 10.1186/gb-2011-12-2-r18. Epub 2011 Feb 21.

PMID:
21338519
[PubMed - indexed for MEDLINE]
Free PMC Article

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