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Results: 1 to 20 of 107

1.

An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation.

Harhay GP, Smith TP, Alexander LJ, Haudenschild CD, Keele JW, Matukumalli LK, Schroeder SG, Van Tassell CP, Gresham CR, Bridges SM, Burgess SC, Sonstegard TS.

Genome Biol. 2010;11(10):R102. doi: 10.1186/gb-2010-11-10-r102. Epub 2010 Oct 20.

PMID:
20961407
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Characterization of 954 bovine full-CDS cDNA sequences.

Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

BMC Genomics. 2005 Nov 23;6:166.

PMID:
16305752
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Novel transcripts discovered by mining genomic DNA from defined regions of bovine chromosome 6.

Weikard R, Goldammer T, Eberlein A, Kuehn C.

BMC Genomics. 2009 Apr 24;10:186. doi: 10.1186/1471-2164-10-186.

PMID:
19393061
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes.

Sclep G, Allemeersch J, Liechti R, De Meyer B, Beynon J, Bhalerao R, Moreau Y, Nietfeld W, Renou JP, Reymond P, Kuiper MT, Hilson P.

BMC Bioinformatics. 2007 Oct 18;8:400.

PMID:
17945016
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles.

Guo S, Liu J, Zheng Y, Huang M, Zhang H, Gong G, He H, Ren Y, Zhong S, Fei Z, Xu Y.

BMC Genomics. 2011 Sep 21;12:454. doi: 10.1186/1471-2164-12-454.

PMID:
21936920
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Novel software package for cross-platform transcriptome analysis (CPTRA).

Zhou X, Su Z, Sammons RD, Peng Y, Tranel PJ, Stewart CN Jr, Yuan JS.

BMC Bioinformatics. 2009 Oct 8;10 Suppl 11:S16. doi: 10.1186/1471-2105-10-S11-S16.

PMID:
19811681
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Generation of a preliminary bovine gene atlas, using expression clustering to annotate gene function.

Keane OM, Maqbool N, McCulloch AF, McEwan JC, Dodds KG.

Genet Mol Res. 2009 Aug 25;8(3):1013-27. doi: 10.4238/vol8-3gmr594.

PMID:
19731199
[PubMed - indexed for MEDLINE]
Free Article
8.

Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index.

Sonstegard TS, Capuco AV, White J, Van Tassell CP, Connor EE, Cho J, Sultana R, Shade L, Wray JE, Wells KD, Quackenbush J.

Mamm Genome. 2002 Jul;13(7):373-9.

PMID:
12140684
[PubMed - indexed for MEDLINE]
9.

Transcriptome profiling of early developing cotton fiber by deep-sequencing reveals significantly differential expression of genes in a fuzzless/lintless mutant.

Wang QQ, Liu F, Chen XS, Ma XJ, Zeng HQ, Yang ZM.

Genomics. 2010 Dec;96(6):369-76. doi: 10.1016/j.ygeno.2010.08.009. Epub 2010 Sep 7.

PMID:
20828606
[PubMed - indexed for MEDLINE]
Free Article
10.

Transcriptome analysis of the medulla tissue from cattle in response to bovine spongiform encephalopathy using digital gene expression tag profiling.

Basu U, Almeida L, Olson NE, Meng Y, Williams JL, Moore SS, Guan LL.

J Toxicol Environ Health A. 2011;74(2-4):127-37. doi: 10.1080/15287394.2011.529062.

PMID:
21218341
[PubMed - indexed for MEDLINE]
11.

Generation and analysis of large-scale expressed sequence tags (ESTs) from a full-length enriched cDNA library of porcine backfat tissue.

Kim TH, Kim NS, Lim D, Lee KT, Oh JH, Park HS, Jang GW, Kim HY, Jeon M, Choi BH, Lee HY, Chung HY, Kim H.

BMC Genomics. 2006 Feb 27;7:36.

PMID:
16504160
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data.

Song S, Qu H, Chen C, Hu S, Yu J.

BMC Plant Biol. 2007 Sep 19;7:49.

PMID:
17877838
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Linkage mapping bovine EST-based SNP.

Snelling WM, Casas E, Stone RT, Keele JW, Harhay GP, Bennett GL, Smith TP.

BMC Genomics. 2005 May 19;6:74.

PMID:
15943875
[PubMed - indexed for MEDLINE]
Free PMC Article
14.
15.

The first insight into the tissue specific taxus transcriptome via Illumina second generation sequencing.

Hao da C, Ge G, Xiao P, Zhang Y, Yang L.

PLoS One. 2011;6(6):e21220. doi: 10.1371/journal.pone.0021220. Epub 2011 Jun 22.

PMID:
21731678
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Identification of tissue-specific, abiotic stress-responsive gene expression patterns in wine grape (Vitis vinifera L.) based on curation and mining of large-scale EST data sets.

Tillett RL, Erg├╝l A, Albion RL, Schlauch KA, Cramer GR, Cushman JC.

BMC Plant Biol. 2011 May 18;11:86. doi: 10.1186/1471-2229-11-86.

PMID:
21592389
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Characterization of a normalized cDNA library from bovine intestinal muscle and epithelial tissues.

Baumann RG, Baldwin RL, Van Tassell CP 6th, Sonstegard TS, Matukumalli LK.

Anim Biotechnol. 2005;16(1):17-29.

PMID:
15926260
[PubMed - indexed for MEDLINE]
19.

Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing.

Weber AP, Weber KL, Carr K, Wilkerson C, Ohlrogge JB.

Plant Physiol. 2007 May;144(1):32-42. Epub 2007 Mar 9.

PMID:
17351049
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences.

Trick M, Cheung F, Drou N, Fraser F, Lobenhofer EK, Hurban P, Magusin A, Town CD, Bancroft I.

BMC Plant Biol. 2009 May 8;9:50. doi: 10.1186/1471-2229-9-50.

PMID:
19426481
[PubMed - indexed for MEDLINE]
Free PMC Article

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