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Results: 1 to 20 of 102

1.

RNA polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast.

Kim TS, Liu CL, Yassour M, Holik J, Friedman N, Buratowski S, Rando OJ.

Genome Biol. 2010;11(7):R75. doi: 10.1186/gb-2010-11-7-r75. Epub 2010 Jul 16.

PMID:
20637075
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors.

Grigull J, Mnaimneh S, Pootoolal J, Robinson MD, Hughes TR.

Mol Cell Biol. 2004 Jun;24(12):5534-47.

PMID:
15169913
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Cooperation between the INO80 complex and histone chaperones determines adaptation of stress gene transcription in the yeast Saccharomyces cerevisiae.

Klopf E, Paskova L, Solé C, Mas G, Petryshyn A, Posas F, Wintersberger U, Ammerer G, Schüller C.

Mol Cell Biol. 2009 Sep;29(18):4994-5007. doi: 10.1128/MCB.01858-08. Epub 2009 Jul 20.

PMID:
19620280
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The peptidyl prolyl isomerase Rrd1 regulates the elongation of RNA polymerase II during transcriptional stresses.

Poschmann J, Drouin S, Jacques PE, El Fadili K, Newmarch M, Robert F, Ramotar D.

PLoS One. 2011;6(8):e23159. doi: 10.1371/journal.pone.0023159. Epub 2011 Aug 24.

PMID:
21887235
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The relative importance of transcription rate, cryptic transcription and mRNA stability on shaping stress responses in yeast.

García-Martínez J, Ayala G, Pelechano V, Chávez S, Herrero E, Pérez-Ortín JE.

Transcription. 2012 Jan-Feb;3(1):39-44. doi: 10.4161/trns.3.1.19416.

PMID:
22456320
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Sub1 associates with Spt5 and influences RNA polymerase II transcription elongation rate.

García A, Collin A, Calvo O.

Mol Biol Cell. 2012 Nov;23(21):4297-312. doi: 10.1091/mbc.E12-04-0331. Epub 2012 Sep 12.

PMID:
22973055
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Phosphorylation of the RNA polymerase II C-terminal domain by TFIIH kinase is not essential for transcription of Saccharomyces cerevisiae genome.

Hong SW, Hong SM, Yoo JW, Lee YC, Kim S, Lis JT, Lee DK.

Proc Natl Acad Sci U S A. 2009 Aug 25;106(34):14276-80. doi: 10.1073/pnas.0903642106. Epub 2009 Aug 7.

PMID:
19666497
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

New mutant versions of yeast FACT subunit Spt16 affect cell integrity.

O'Donnell AF, Stevens JR, Kepkay R, Barnes CA, Johnston GC, Singer RA.

Mol Genet Genomics. 2009 Nov;282(5):487-502. doi: 10.1007/s00438-009-0480-4. Epub 2009 Sep 1.

PMID:
19727824
[PubMed - indexed for MEDLINE]
9.

XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.

van Dijk EL, Chen CL, d'Aubenton-Carafa Y, Gourvennec S, Kwapisz M, Roche V, Bertrand C, Silvain M, Legoix-Né P, Loeillet S, Nicolas A, Thermes C, Morillon A.

Nature. 2011 Jun 22;475(7354):114-7. doi: 10.1038/nature10118.

PMID:
21697827
[PubMed - indexed for MEDLINE]
10.

Quantification of mRNA stability of stress-responsive yeast genes following conditional excision of open reading frames.

Talarek N, Bontron S, De Virgilio C.

RNA Biol. 2013 Aug 1;10(8):1299-308. doi: 10.4161/rna.25355. Epub 2013 Jun 13.

PMID:
23792549
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A complete set of nascent transcription rates for yeast genes.

Pelechano V, Chávez S, Pérez-Ortín JE.

PLoS One. 2010 Nov 16;5(11):e15442. doi: 10.1371/journal.pone.0015442.

PMID:
21103382
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Control of chromatin structure by spt6: different consequences in coding and regulatory regions.

Ivanovska I, Jacques PÉ, Rando OJ, Robert F, Winston F.

Mol Cell Biol. 2011 Feb;31(3):531-41. doi: 10.1128/MCB.01068-10. Epub 2010 Nov 22.

PMID:
21098123
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The AMP-activated protein kinase Snf1 regulates transcription factor binding, RNA polymerase II activity, and mRNA stability of glucose-repressed genes in Saccharomyces cerevisiae.

Young ET, Zhang C, Shokat KM, Parua PK, Braun KA.

J Biol Chem. 2012 Aug 17;287(34):29021-34. doi: 10.1074/jbc.M112.380147. Epub 2012 Jul 2.

PMID:
22761425
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Snf1/AMPK promotes SBF and MBF-dependent transcription in budding yeast.

Busnelli S, Tripodi F, Nicastro R, Cirulli C, Tedeschi G, Pagliarin R, Alberghina L, Coccetti P.

Biochim Biophys Acta. 2013 Dec;1833(12):3254-64. doi: 10.1016/j.bbamcr.2013.09.014. Epub 2013 Sep 29.

PMID:
24084603
[PubMed - indexed for MEDLINE]
15.

Genome-wide analysis of mRNA lengths in Saccharomyces cerevisiae.

Hurowitz EH, Brown PO.

Genome Biol. 2003;5(1):R2. Epub 2003 Dec 22.

PMID:
14709174
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Global mRNA expression analysis in myosin II deficient strains of Saccharomyces cerevisiae reveals an impairment of cell integrity functions.

Rodríguez-Quiñones JF, Irizarry RA, Díaz-Blanco NL, Rivera-Molina FE, Gómez-Garzón D, Rodríguez-Medina JR.

BMC Genomics. 2008 Jan 23;9:34. doi: 10.1186/1471-2164-9-34.

PMID:
18215314
[PubMed - indexed for MEDLINE]
Free PMC Article
17.
18.

Hog1 controls global reallocation of RNA Pol II upon osmotic shock in Saccharomyces cerevisiae.

Cook KE, O'Shea EK.

G3 (Bethesda). 2012 Sep;2(9):1129-36. doi: 10.1534/g3.112.003251. Epub 2012 Sep 1.

PMID:
22973550
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Gene loops juxtapose promoters and terminators in yeast.

O'Sullivan JM, Tan-Wong SM, Morillon A, Lee B, Coles J, Mellor J, Proudfoot NJ.

Nat Genet. 2004 Sep;36(9):1014-8. Epub 2004 Aug 15.

PMID:
15314641
[PubMed - indexed for MEDLINE]
20.

Regulation of a eukaryotic gene by GTP-dependent start site selection and transcription attenuation.

Kuehner JN, Brow DA.

Mol Cell. 2008 Jul 25;31(2):201-11. doi: 10.1016/j.molcel.2008.05.018.

PMID:
18657503
[PubMed - indexed for MEDLINE]
Free Article

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