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Results: 1 to 20 of 84

1.

Quantifying the mechanisms of domain gain in animal proteins.

Buljan M, Frankish A, Bateman A.

Genome Biol. 2010;11(7):R74. doi: 10.1186/gb-2010-11-7-r74. Epub 2010 Jul 15.

PMID:
20633280
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The relationship between domain duplication and recombination.

Vogel C, Teichmann SA, Pereira-Leal J.

J Mol Biol. 2005 Feb 11;346(1):355-65. Epub 2004 Dec 23.

PMID:
15663950
[PubMed - indexed for MEDLINE]
3.

How do proteins gain new domains?

Marsh JA, Teichmann SA.

Genome Biol. 2010;11(7):126. doi: 10.1186/gb-2010-11-7-126. Epub 2010 Jul 15.

PMID:
20630117
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The origins of polypeptide domains.

Schmidt EE, Davies CJ.

Bioessays. 2007 Mar;29(3):262-70. Review.

PMID:
17295290
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evolution of double MutT/Nudix domain-containing proteins: similar domain architectures from independent gene duplication-fusion events.

Lin J, Hu Y, Tian B, Hua Y.

J Genet Genomics. 2009 Oct;36(10):603-10. doi: 10.1016/S1673-8527(08)60152-6.

PMID:
19840758
[PubMed - indexed for MEDLINE]
6.

Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene.

Amit M, Sela N, Keren H, Melamed Z, Muler I, Shomron N, Izraeli S, Ast G.

BMC Mol Biol. 2007 Nov 29;8:109.

PMID:
18047649
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Mammalian BEX, WEX and GASP genes: coding and non-coding chimaerism sustained by gene conversion events.

Winter EE, Ponting CP.

BMC Evol Biol. 2005 Oct 12;5:54.

PMID:
16221301
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes.

Baumbusch LO, Thorstensen T, Krauss V, Fischer A, Naumann K, Assalkhou R, Schulz I, Reuter G, Aalen RB.

Nucleic Acids Res. 2001 Nov 1;29(21):4319-33.

PMID:
11691919
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Evolution at the subgene level: domain rearrangements in the Drosophila phylogeny.

Wu YC, Rasmussen MD, Kellis M.

Mol Biol Evol. 2012 Feb;29(2):689-705. doi: 10.1093/molbev/msr222. Epub 2011 Sep 7.

PMID:
21900599
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Evolution of antiparallel two-domain membrane proteins: tracing multiple gene duplication events in the DUF606 family.

Lolkema JS, Dobrowolski A, Slotboom DJ.

J Mol Biol. 2008 May 2;378(3):596-606. doi: 10.1016/j.jmb.2008.03.005. Epub 2008 Mar 12.

PMID:
18384811
[PubMed - indexed for MEDLINE]
11.

Pervasive indels and their evolutionary dynamics after the fish-specific genome duplication.

Guo B, Zou M, Wagner A.

Mol Biol Evol. 2012 Oct;29(10):3005-22. Epub 2012 Apr 4.

PMID:
22490820
[PubMed - indexed for MEDLINE]
Free Article
12.

Analysis of evolution of exon-intron structure of eukaryotic genes.

Rogozin IB, Sverdlov AV, Babenko VN, Koonin EV.

Brief Bioinform. 2005 Jun;6(2):118-34. Review.

PMID:
15975222
[PubMed - indexed for MEDLINE]
Free Article
13.

Exonization of transposed elements: A challenge and opportunity for evolution.

Schmitz J, Brosius J.

Biochimie. 2011 Nov;93(11):1928-34. doi: 10.1016/j.biochi.2011.07.014. Epub 2011 Jul 26. Review.

PMID:
21787833
[PubMed - indexed for MEDLINE]
14.

Accelerated exchange of exon segments in Viperid three-finger toxin genes (Sistrurus catenatus edwardsii; Desert Massasauga).

Doley R, Pahari S, Mackessy SP, Kini RM.

BMC Evol Biol. 2008 Jul 8;8:196. doi: 10.1186/1471-2148-8-196.

PMID:
18606022
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Prevalence of intron gain over intron loss in the evolution of paralogous gene families.

Babenko VN, Rogozin IB, Mekhedov SL, Koonin EV.

Nucleic Acids Res. 2004 Jul 14;32(12):3724-33. Print 2004.

PMID:
15254274
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Inference for the initial stage of domain shuffling: tracing the evolutionary fate of the PIPSL retrogene in hominoids.

Ohshima K, Igarashi K.

Mol Biol Evol. 2010 Nov;27(11):2522-33. doi: 10.1093/molbev/msq138. Epub 2010 Jun 4.

PMID:
20525901
[PubMed - indexed for MEDLINE]
Free Article
17.

The role of transposable elements in the evolution of non-mammalian vertebrates and invertebrates.

Sela N, Kim E, Ast G.

Genome Biol. 2010;11(6):R59. doi: 10.1186/gb-2010-11-6-r59. Epub 2010 Jun 2.

PMID:
20525173
[PubMed - indexed for MEDLINE]
Free PMC Article
18.
20.

Domain combinations in archaeal, eubacterial and eukaryotic proteomes.

Apic G, Gough J, Teichmann SA.

J Mol Biol. 2001 Jul 6;310(2):311-25.

PMID:
11428892
[PubMed - indexed for MEDLINE]

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