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Results: 1 to 20 of 96

1.

How do proteins gain new domains?

Marsh JA, Teichmann SA.

Genome Biol. 2010;11(7):126. doi: 10.1186/gb-2010-11-7-126. Epub 2010 Jul 15.

PMID:
20630117
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Quantifying the mechanisms of domain gain in animal proteins.

Buljan M, Frankish A, Bateman A.

Genome Biol. 2010;11(7):R74. doi: 10.1186/gb-2010-11-7-r74. Epub 2010 Jul 15.

PMID:
20633280
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Exon structure conservation despite low sequence similarity: a relic of dramatic events in evolution?

Betts MJ, Guigó R, Agarwal P, Russell RB.

EMBO J. 2001 Oct 1;20(19):5354-60.

PMID:
11574467
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Signs of ancient and modern exon-shuffling are correlated to the distribution of ancient and modern domains along proteins.

Vibranovski MD, Sakabe NJ, de Oliveira RS, de Souza SJ.

J Mol Evol. 2005 Sep;61(3):341-50. Epub 2005 Jul 18.

PMID:
16034650
[PubMed - indexed for MEDLINE]
5.

Accelerated exchange of exon segments in Viperid three-finger toxin genes (Sistrurus catenatus edwardsii; Desert Massasauga).

Doley R, Pahari S, Mackessy SP, Kini RM.

BMC Evol Biol. 2008 Jul 8;8:196. doi: 10.1186/1471-2148-8-196.

PMID:
18606022
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution.

Wolf MY, Wolf YI, Koonin EV.

Biol Direct. 2008 Oct 7;3:40. doi: 10.1186/1745-6150-3-40.

PMID:
18840284
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Modules, multidomain proteins and organismic complexity.

Tordai H, Nagy A, Farkas K, Bányai L, Patthy L.

FEBS J. 2005 Oct;272(19):5064-78.

PMID:
16176277
[PubMed - indexed for MEDLINE]
Free Article
8.

The evolution of the pro-domain of bone morphogenetic protein 4 (Bmp4) in an explosively speciated lineage of East African cichlid fishes.

Terai Y, Morikawa N, Okada N.

Mol Biol Evol. 2002 Sep;19(9):1628-32. No abstract available.

PMID:
12200490
[PubMed - indexed for MEDLINE]
Free Article
9.

Modeling the evolution dynamics of exon-intron structure with a general random fragmentation process.

Wang L, Stein LD.

BMC Evol Biol. 2013 Feb 28;13:57. doi: 10.1186/1471-2148-13-57.

PMID:
23448166
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Signatures of domain shuffling in the human genome.

Kaessmann H, Zöllner S, Nekrutenko A, Li WH.

Genome Res. 2002 Nov;12(11):1642-50.

PMID:
12421750
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Evolutionarily conserved multiple C2 domain proteins with two transmembrane regions (MCTPs) and unusual Ca2+ binding properties.

Shin OH, Han W, Wang Y, Südhof TC.

J Biol Chem. 2005 Jan 14;280(2):1641-51. Epub 2004 Nov 4.

PMID:
15528213
[PubMed - indexed for MEDLINE]
Free Article
12.

Significant expansion of exon-bordering protein domains during animal proteome evolution.

Liu M, Walch H, Wu S, Grigoriev A.

Nucleic Acids Res. 2005 Jan 7;33(1):95-105. Print 2005.

PMID:
15640447
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Phospholipase C-gamma contains introns shared by src homology 2 domains in many unrelated proteins.

Manning CM, Mathews WR, Fico LP, Thackeray JR.

Genetics. 2003 Jun;164(2):433-42.

PMID:
12807765
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Arrangements in the modular evolution of proteins.

Moore AD, Björklund AK, Ekman D, Bornberg-Bauer E, Elofsson A.

Trends Biochem Sci. 2008 Sep;33(9):444-51. doi: 10.1016/j.tibs.2008.05.008. Epub 2008 Jul 24. Review.

PMID:
18656364
[PubMed - indexed for MEDLINE]
15.

Mapping of the minimal inorganic phosphate transporting unit of human PiT2 suggests a structure universal to PiT-related proteins from all kingdoms of life.

Bøttger P, Pedersen L.

BMC Biochem. 2011 May 17;12:21. doi: 10.1186/1471-2091-12-21.

PMID:
21586110
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The evolution of protein domain families.

Buljan M, Bateman A.

Biochem Soc Trans. 2009 Aug;37(Pt 4):751-5. doi: 10.1042/BST0370751. Review.

PMID:
19614588
[PubMed - indexed for MEDLINE]
Free Article
17.

Conservation and diversification of Msx protein in metazoan evolution.

Takahashi H, Kamiya A, Ishiguro A, Suzuki AC, Saitou N, Toyoda A, Aruga J.

Mol Biol Evol. 2008 Jan;25(1):69-82. Epub 2007 Oct 16.

PMID:
17940209
[PubMed - indexed for MEDLINE]
Free Article
18.

The brain link protein-1 (BRAL1): cDNA cloning, genomic structure, and characterization as a novel link protein expressed in adult brain.

Hirakawa S, Oohashi T, Su WD, Yoshioka H, Murakami T, Arata J, Ninomiya Y.

Biochem Biophys Res Commun. 2000 Oct 5;276(3):982-9.

PMID:
11027579
[PubMed - indexed for MEDLINE]
19.

Analysis of evolution of exon-intron structure of eukaryotic genes.

Rogozin IB, Sverdlov AV, Babenko VN, Koonin EV.

Brief Bioinform. 2005 Jun;6(2):118-34. Review.

PMID:
15975222
[PubMed - indexed for MEDLINE]
Free Article
20.

Phylogenetic analysis and evolution of aromatic amino acid hydroxylase.

Cao J, Shi F, Liu X, Huang G, Zhou M.

FEBS Lett. 2010 Dec 1;584(23):4775-82. doi: 10.1016/j.febslet.2010.11.005. Epub 2010 Nov 10.

PMID:
21073869
[PubMed - indexed for MEDLINE]
Free Article

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