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Results: 1 to 20 of 87

1.

The origin and early evolution of eukaryotes in the light of phylogenomics.

Koonin EV.

Genome Biol. 2010;11(5):209. doi: 10.1186/gb-2010-11-5-209. Epub 2010 May 5.

PMID:
20441612
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Reconciling an archaeal origin of eukaryotes with engulfment: a biologically plausible update of the Eocyte hypothesis.

Poole AM, Neumann N.

Res Microbiol. 2011 Jan;162(1):71-6. doi: 10.1016/j.resmic.2010.10.002. Epub 2010 Oct 27.

PMID:
21034814
[PubMed - indexed for MEDLINE]
3.

Phylogenomic analysis of the cystatin superfamily in eukaryotes and prokaryotes.

Kordis D, Turk V.

BMC Evol Biol. 2009 Nov 18;9:266. doi: 10.1186/1471-2148-9-266.

PMID:
19919722
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Archaeal phylogenomics provides evidence in support of a methanogenic origin of the Archaea and a thaumarchaeal origin for the eukaryotes.

Kelly S, Wickstead B, Gull K.

Proc Biol Sci. 2011 Apr 7;278(1708):1009-18. doi: 10.1098/rspb.2010.1427. Epub 2010 Sep 29.

PMID:
20880885
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

On the last common ancestor and early evolution of eukaryotes: reconstructing the history of mitochondrial ribosomes.

Desmond E, Brochier-Armanet C, Forterre P, Gribaldo S.

Res Microbiol. 2011 Jan;162(1):53-70. doi: 10.1016/j.resmic.2010.10.004. Epub 2010 Oct 27.

PMID:
21034815
[PubMed - indexed for MEDLINE]
6.

Origins and early evolution of the mevalonate pathway of isoprenoid biosynthesis in the three domains of life.

Lombard J, Moreira D.

Mol Biol Evol. 2011 Jan;28(1):87-99. doi: 10.1093/molbev/msq177. Epub 2010 Jul 22.

PMID:
20651049
[PubMed - indexed for MEDLINE]
Free Article
7.

The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?

Gribaldo S, Poole AM, Daubin V, Forterre P, Brochier-Armanet C.

Nat Rev Microbiol. 2010 Oct;8(10):743-52. doi: 10.1038/nrmicro2426.

PMID:
20844558
[PubMed - indexed for MEDLINE]
8.

Gene descent, duplication, and horizontal transfer in the evolution of glutamyl- and glutaminyl-tRNA synthetases.

Brown JR, Doolittle WF.

J Mol Evol. 1999 Oct;49(4):485-95.

PMID:
10486006
[PubMed - indexed for MEDLINE]
9.

Transitional forms between the three domains of life and evolutionary implications.

Reynaud EG, Devos DP.

Proc Biol Sci. 2011 Nov 22;278(1723):3321-8. doi: 10.1098/rspb.2011.1581. Epub 2011 Sep 14.

PMID:
21920985
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

The common ancestor of archaea and eukarya was not an archaeon.

Forterre P.

Archaea. 2013;2013:372396. doi: 10.1155/2013/372396. Epub 2013 Nov 17. Review.

PMID:
24348094
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Phylogenomics reshuffles the eukaryotic supergroups.

Burki F, Shalchian-Tabrizi K, Minge M, Skjaeveland A, Nikolaev SI, Jakobsen KS, Pawlowski J.

PLoS One. 2007 Aug 29;2(8):e790.

PMID:
17726520
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Gene similarity networks provide tools for understanding eukaryote origins and evolution.

Alvarez-Ponce D, Lopez P, Bapteste E, McInerney JO.

Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):E1594-603. doi: 10.1073/pnas.1211371110. Epub 2013 Apr 1.

PMID:
23576716
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Rooted phylogeny of the three superkingdoms.

Harish A, Tunlid A, Kurland CG.

Biochimie. 2013 Aug;95(8):1593-604. doi: 10.1016/j.biochi.2013.04.016. Epub 2013 May 11.

PMID:
23669449
[PubMed - indexed for MEDLINE]
14.

Metaxa: a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets.

Bengtsson J, Eriksson KM, Hartmann M, Wang Z, Shenoy BD, Grelet GA, Abarenkov K, Petri A, Rosenblad MA, Nilsson RH.

Antonie Van Leeuwenhoek. 2011 Oct;100(3):471-5. doi: 10.1007/s10482-011-9598-6. Epub 2011 Jun 15.

PMID:
21674231
[PubMed - indexed for MEDLINE]
15.

Archaea and the prokaryote-to-eukaryote transition.

Brown JR, Doolittle WF.

Microbiol Mol Biol Rev. 1997 Dec;61(4):456-502. Review.

PMID:
9409149
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The archaeal 'TACK' superphylum and the origin of eukaryotes.

Guy L, Ettema TJ.

Trends Microbiol. 2011 Dec;19(12):580-7. doi: 10.1016/j.tim.2011.09.002. Epub 2011 Oct 20.

PMID:
22018741
[PubMed - indexed for MEDLINE]
17.

Phylogenomics supports a cellularly structured urancestor.

Seufferheld MJ, Caetano-Anoll├ęs G.

J Mol Microbiol Biotechnol. 2013;23(1-2):178-91. doi: 10.1159/000346552. Epub 2013 Apr 18. Review.

PMID:
23615204
[PubMed - indexed for MEDLINE]
18.

Sulcozoa revealed as a paraphyletic group in mitochondrial phylogenomics.

Zhao S, Shalchian-Tabrizi K, Klaveness D.

Mol Phylogenet Evol. 2013 Dec;69(3):462-8. doi: 10.1016/j.ympev.2013.08.005. Epub 2013 Aug 22.

PMID:
23973893
[PubMed - indexed for MEDLINE]
19.

The origin and evolution of model organisms.

Hedges SB.

Nat Rev Genet. 2002 Nov;3(11):838-49. Review.

PMID:
12415314
[PubMed - indexed for MEDLINE]
20.

Mitochondrial evolution.

Gray MW, Burger G, Lang BF.

Science. 1999 Mar 5;283(5407):1476-81. Review.

PMID:
10066161
[PubMed - indexed for MEDLINE]

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