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Results: 1 to 20 of 61

1.

Direct sequencing of the human microbiome readily reveals community differences.

Kuczynski J, Costello EK, Nemergut DR, Zaneveld J, Lauber CL, Knights D, Koren O, Fierer N, Kelley ST, Ley RE, Gordon JI, Knight R.

Genome Biol. 2010;11(5):210. doi: 10.1186/gb-2010-11-5-210. Epub 2010 May 5. Review.

PMID:
20441597
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Analysis of multitag pyrosequence data from human cervical lavage samples.

Naqvi A, Rangwala H, Spear G, Gillevet P.

Chem Biodivers. 2010 May;7(5):1076-85. doi: 10.1002/cbdv.200900321.

PMID:
20491067
[PubMed - indexed for MEDLINE]
3.

The NIH Human Microbiome Project.

NIH HMP Working Group, Peterson J, Garges S, Giovanni M, McInnes P, Wang L, Schloss JA, Bonazzi V, McEwen JE, Wetterstrand KA, Deal C, Baker CC, Di Francesco V, Howcroft TK, Karp RW, Lunsford RD, Wellington CR, Belachew T, Wright M, Giblin C, David H, Mills M, Salomon R, Mullins C, Akolkar B, Begg L, Davis C, Grandison L, Humble M, Khalsa J, Little AR, Peavy H, Pontzer C, Portnoy M, Sayre MH, Starke-Reed P, Zakhari S, Read J, Watson B, Guyer M.

Genome Res. 2009 Dec;19(12):2317-23. doi: 10.1101/gr.096651.109. Epub 2009 Oct 9.

PMID:
19819907
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Has the use of molecular methods for the characterization of the human oral microbiome changed our understanding of the role of bacteria in the pathogenesis of periodontal disease?

Wade WG.

J Clin Periodontol. 2011 Mar;38 Suppl 11:7-16. doi: 10.1111/j.1600-051X.2010.01679.x. Review.

PMID:
21323699
[PubMed - indexed for MEDLINE]
5.

Tag-encoded FLX amplicon pyrosequencing for the elucidation of microbial and functional gene diversity in any environment.

Sun Y, Wolcott RD, Dowd SE.

Methods Mol Biol. 2011;733:129-41. doi: 10.1007/978-1-61779-089-8_9.

PMID:
21431767
[PubMed - indexed for MEDLINE]
6.

Development of the human gastrointestinal microbiota and insights from high-throughput sequencing.

Dominguez-Bello MG, Blaser MJ, Ley RE, Knight R.

Gastroenterology. 2011 May;140(6):1713-9. doi: 10.1053/j.gastro.2011.02.011. Review.

PMID:
21530737
[PubMed - indexed for MEDLINE]
7.

Pyrosequence analysis of unamplified and whole genome amplified DNA from hydrocarbon-contaminated groundwater.

Abbai NS, Govender A, Shaik R, Pillay B.

Mol Biotechnol. 2012 Jan;50(1):39-48. doi: 10.1007/s12033-011-9412-8.

PMID:
21656086
[PubMed - indexed for MEDLINE]
8.

Gastrointestinal microbiology enters the metagenomics era.

Frank DN, Pace NR.

Curr Opin Gastroenterol. 2008 Jan;24(1):4-10. Review.

PMID:
18043225
[PubMed - indexed for MEDLINE]
9.

Getting to know our guests: characterizing the reproductive microbiome by next generation sequencing. Preface.

Miller D.

Syst Biol Reprod Med. 2011 Jun;57(3):117-8. doi: 10.3109/19396368.2011.565111. No abstract available.

PMID:
21568829
[PubMed - indexed for MEDLINE]
10.

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes.

Tasse L, Bercovici J, Pizzut-Serin S, Robe P, Tap J, Klopp C, Cantarel BL, Coutinho PM, Henrissat B, Leclerc M, Doré J, Monsan P, Remaud-Simeon M, Potocki-Veronese G.

Genome Res. 2010 Nov;20(11):1605-12. doi: 10.1101/gr.108332.110. Epub 2010 Sep 14.

PMID:
20841432
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

[Metagenomics of the intestinal microbiota: potential applications].

Dusko Ehrlich S; MetaHIT consortium.

Gastroenterol Clin Biol. 2010 Sep;34 Suppl 1:S23-8. doi: 10.1016/S0399-8320(10)70017-8. French.

PMID:
20889001
[PubMed - indexed for MEDLINE]
Free Article
12.

Genomic approaches to studying the human microbiota.

Weinstock GM.

Nature. 2012 Sep 13;489(7415):250-6. doi: 10.1038/nature11553. Review.

PMID:
22972298
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Soil microbial community analysis using two-dimensional polyacrylamide gel electrophoresis of the bacterial ribosomal internal transcribed spacer regions.

Jones CM, Thies JE.

J Microbiol Methods. 2007 May;69(2):256-67. Epub 2007 Jan 18.

PMID:
17343936
[PubMed - indexed for MEDLINE]
14.

Comparative analysis of human saliva microbiome diversity by barcoded pyrosequencing and cloning approaches.

Nasidze I, Quinque D, Li J, Li M, Tang K, Stoneking M.

Anal Biochem. 2009 Aug 1;391(1):64-8. doi: 10.1016/j.ab.2009.04.034. Epub 2009 May 3.

PMID:
19406095
[PubMed - indexed for MEDLINE]
15.

The human microbiome harbors a diverse reservoir of antibiotic resistance genes.

Sommer MO, Church GM, Dantas G.

Virulence. 2010 Jul-Aug;1(4):299-303. doi: 10.4161/viru.1.4.12010.

PMID:
21178459
[PubMed - indexed for MEDLINE]
Free Article
16.

Metagenomics--the key to the uncultured microbes.

Streit WR, Schmitz RA.

Curr Opin Microbiol. 2004 Oct;7(5):492-8. Review.

PMID:
15451504
[PubMed - indexed for MEDLINE]
17.

High-throughput methods for analysis of the human oral microbiome.

Pozhitkov AE, Beikler T, Flemmig T, Noble PA.

Periodontol 2000. 2011 Feb;55(1):70-86. doi: 10.1111/j.1600-0757.2010.00380.x. Review. No abstract available.

PMID:
21134229
[PubMed - indexed for MEDLINE]
18.

The microbiome extends to subepidermal compartments of normal skin.

Nakatsuji T, Chiang HI, Jiang SB, Nagarajan H, Zengler K, Gallo RL.

Nat Commun. 2013;4:1431. doi: 10.1038/ncomms2441.

PMID:
23385576
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The noncolonic microbiome: does it really matter?

Lawson RD, Coyle WJ.

Curr Gastroenterol Rep. 2010 Aug;12(4):259-62. doi: 10.1007/s11894-010-0111-6. Review.

PMID:
20532707
[PubMed - indexed for MEDLINE]
20.

A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes.

Willing BP, Dicksved J, Halfvarson J, Andersson AF, Lucio M, Zheng Z, Järnerot G, Tysk C, Jansson JK, Engstrand L.

Gastroenterology. 2010 Dec;139(6):1844-1854.e1. doi: 10.1053/j.gastro.2010.08.049. Epub 2010 Oct 8.

PMID:
20816835
[PubMed - indexed for MEDLINE]

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