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Results: 1 to 20 of 71

1.

Small variable segments constitute a major type of diversity of bacterial genomes at the species level.

Touzain F, Denamur E, Médigue C, Barbe V, El Karoui M, Petit MA.

Genome Biol. 2010;11(4):R45. doi: 10.1186/gb-2010-11-4-r45. Epub 2010 Apr 30.

PMID:
20433696
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Evolution of paralogous genes: Reconstruction of genome rearrangements through comparison of multiple genomes within Staphylococcus aureus.

Tsuru T, Kawai M, Mizutani-Ui Y, Uchiyama I, Kobayashi I.

Mol Biol Evol. 2006 Jun;23(6):1269-85. Epub 2006 Apr 6.

PMID:
16601000
[PubMed - indexed for MEDLINE]
Free Article
3.

Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence.

Remenant B, Coupat-Goutaland B, Guidot A, Cellier G, Wicker E, Allen C, Fegan M, Pruvost O, Elbaz M, Calteau A, Salvignol G, Mornico D, Mangenot S, Barbe V, Médigue C, Prior P.

BMC Genomics. 2010 Jun 15;11:379. doi: 10.1186/1471-2164-11-379.

PMID:
20550686
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Understanding the differences between genome sequences of Escherichia coli B strains REL606 and BL21(DE3) and comparison of the E. coli B and K-12 genomes.

Studier FW, Daegelen P, Lenski RE, Maslov S, Kim JF.

J Mol Biol. 2009 Dec 11;394(4):653-80. doi: 10.1016/j.jmb.2009.09.021. Epub 2009 Sep 15.

PMID:
19765592
[PubMed - indexed for MEDLINE]
5.

Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.

Binnewies TT, Motro Y, Hallin PF, Lund O, Dunn D, La T, Hampson DJ, Bellgard M, Wassenaar TM, Ussery DW.

Funct Integr Genomics. 2006 Jul;6(3):165-85. Epub 2006 May 12. Review.

PMID:
16773396
[PubMed - indexed for MEDLINE]
6.

Multiple genome comparison within a bacterial species reveals a unit of evolution spanning two adjacent genes in a tandem paralog cluster.

Tsuru T, Kobayashi I.

Mol Biol Evol. 2008 Nov;25(11):2457-73. doi: 10.1093/molbev/msn192. Epub 2008 Sep 2.

PMID:
18765438
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genomic comparisons among Escherichia coli strains B, K-12, and O157:H7 using IS elements as molecular markers.

Schneider D, Duperchy E, Depeyrot J, Coursange E, Lenski R, Blot M.

BMC Microbiol. 2002 Jul 9;2:18.

PMID:
12106505
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genome-wide analysis of ruminant Staphylococcus aureus reveals diversification of the core genome.

Ben Zakour NL, Sturdevant DE, Even S, Guinane CM, Barbey C, Alves PD, Cochet MF, Gautier M, Otto M, Fitzgerald JR, Le Loir Y.

J Bacteriol. 2008 Oct;190(19):6302-17. doi: 10.1128/JB.01984-07. Epub 2008 Jun 20.

PMID:
18567666
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome diversification in Staphylococcus aureus: Molecular evolution of a highly variable chromosomal region encoding the Staphylococcal exotoxin-like family of proteins.

Fitzgerald JR, Reid SD, Ruotsalainen E, Tripp TJ, Liu M, Cole R, Kuusela P, Schlievert PM, Järvinen A, Musser JM.

Infect Immun. 2003 May;71(5):2827-38.

PMID:
12704157
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

[Plasticity of bacterial genomes: pathogenicity islands and the locus of enterocyte effacement (LEE)].

Kirsch P, Jores J, Wieler LH.

Berl Munch Tierarztl Wochenschr. 2004 Mar-Apr;117(3-4):116-29. Review. German.

PMID:
15046458
[PubMed - indexed for MEDLINE]
11.

ILG1 : a new integrase-like gene that is a marker of bacterial contamination by the laboratory Escherichia coli strain TOP10F'.

Tian W, Chua K, Strober W, Chu CC.

Mol Med. 2002 Jul;8(7):405-16.

PMID:
12393938
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea.

Koonin EV, Mushegian AR, Galperin MY, Walker DR.

Mol Microbiol. 1997 Aug;25(4):619-37.

PMID:
9379893
[PubMed - indexed for MEDLINE]
13.

Gene amelioration demonstrated: the journey of nascent genes in bacteria.

Marri PR, Golding GB.

Genome. 2008 Feb;51(2):164-8. doi: 10.1139/g07-105.

PMID:
18356951
[PubMed - indexed for MEDLINE]
14.

M-protein and other intrinsic virulence factors of Streptococcus pyogenes are encoded on an ancient pathogenicity island.

Panchaud A, Guy L, Collyn F, Haenni M, Nakata M, Podbielski A, Moreillon P, Roten CA.

BMC Genomics. 2009 Apr 27;10:198. doi: 10.1186/1471-2164-10-198.

PMID:
19397826
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Conservation in the face of diversity: multistrain analysis of an intracellular bacterium.

Dark MJ, Herndon DR, Kappmeyer LS, Gonzales MP, Nordeen E, Palmer GH, Knowles DP Jr, Brayton KA.

BMC Genomics. 2009 Jan 11;10:16. doi: 10.1186/1471-2164-10-16.

PMID:
19134224
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages.

Juhala RJ, Ford ME, Duda RL, Youlton A, Hatfull GF, Hendrix RW.

J Mol Biol. 2000 May 26;299(1):27-51.

PMID:
10860721
[PubMed - indexed for MEDLINE]
17.

A comprehensive genetic study of streptococcal immunoglobulin A1 proteases: evidence for recombination within and between species.

Poulsen K, Reinholdt J, Jespersgaard C, Boye K, Brown TA, Hauge M, Kilian M.

Infect Immun. 1998 Jan;66(1):181-90.

PMID:
9423856
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genome sequences of Escherichia coli B strains REL606 and BL21(DE3).

Jeong H, Barbe V, Lee CH, Vallenet D, Yu DS, Choi SH, Couloux A, Lee SW, Yoon SH, Cattolico L, Hur CG, Park HS, Ségurens B, Kim SC, Oh TK, Lenski RE, Studier FW, Daegelen P, Kim JF.

J Mol Biol. 2009 Dec 11;394(4):644-52. doi: 10.1016/j.jmb.2009.09.052. Epub 2009 Sep 26.

PMID:
19786035
[PubMed - indexed for MEDLINE]
19.

Variations in the distribution of genes encoding virulence and extracellular proteins in group A streptococcus are largely restricted to 11 genomic loci.

McMillan DJ, Geffers R, Buer J, Vlaminckx BJ, Sriprakash KS, Chhatwal GS.

Microbes Infect. 2007 Mar;9(3):259-70. Epub 2006 Dec 23.

PMID:
17307378
[PubMed - indexed for MEDLINE]
20.

Molecular population genetic analysis of the enn subdivision of group A streptococcal emm-like genes: horizontal gene transfer and restricted variation among enn genes.

Whatmore AM, Kapur V, Musser JM, Kehoe MA.

Mol Microbiol. 1995 Mar;15(6):1039-48.

PMID:
7623660
[PubMed - indexed for MEDLINE]

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