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Results: 1 to 20 of 76

1.

Restriction Site Tiling Analysis: accurate discovery and quantitative genotyping of genome-wide polymorphisms using nucleotide arrays.

Pespeni MH, Oliver TA, Manier MK, Palumbi SR.

Genome Biol. 2010;11(4):R44. doi: 10.1186/gb-2010-11-4-r44. Epub 2010 Apr 19.

PMID:
20403197
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

High-throughput polymorphism screening and genotyping with high-density oligonucleotide arrays.

Sapolsky RJ, Hsie L, Berno A, Ghandour G, Mittmann M, Fan JB.

Genet Anal. 1999 Feb;14(5-6):187-92.

PMID:
10084113
[PubMed - indexed for MEDLINE]
3.

Genome-wide polymorphisms show unexpected targets of natural selection.

Pespeni MH, Garfield DA, Manier MK, Palumbi SR.

Proc Biol Sci. 2012 Apr 7;279(1732):1412-20. doi: 10.1098/rspb.2011.1823. Epub 2011 Oct 12.

PMID:
21993504
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Applications of DNA tiling arrays for whole-genome analysis.

Mockler TC, Chan S, Sundaresan A, Chen H, Jacobsen SE, Ecker JR.

Genomics. 2005 Jan;85(1):1-15. Review. Erratum in: Genomics. 2005 May;85(5):655. Chan, Simon [added]; Sundaresan, Ambika [added]; Chen, Huaming [added]; Jacobsen, Steven E [added].

PMID:
15607417
[PubMed - indexed for MEDLINE]
5.

Population genomic analysis of Tunisian Medicago truncatula reveals candidates for local adaptation.

Friesen ML, Cordeiro MA, Penmetsa RV, Badri M, Huguet T, Aouani ME, Cook DR, Nuzhdin SV.

Plant J. 2010 Aug;63(4):623-35. doi: 10.1111/j.1365-313X.2010.04267.x.

PMID:
20545888
[PubMed - indexed for MEDLINE]
6.

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers.

Miller MR, Dunham JP, Amores A, Cresko WA, Johnson EA.

Genome Res. 2007 Feb;17(2):240-8. Epub 2006 Dec 22.

PMID:
17189378
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A microarray-based genotyping and genetic mapping approach for highly heterozygous outcrossing species enables localization of a large fraction of the unassembled Populus trichocarpa genome sequence.

Drost DR, Novaes E, Boaventura-Novaes C, Benedict CI, Brown RS, Yin T, Tuskan GA, Kirst M.

Plant J. 2009 Jun;58(6):1054-67. doi: 10.1111/j.1365-313X.2009.03828.x. Epub 2009 Feb 10. Erratum in: Plant J. 2009 Dec;60(5):929.

PMID:
19220791
[PubMed - indexed for MEDLINE]
8.

The transcriptome of the sea urchin embryo.

Samanta MP, Tongprasit W, Istrail S, Cameron RA, Tu Q, Davidson EH, Stolc V.

Science. 2006 Nov 10;314(5801):960-2.

PMID:
17095694
[PubMed - indexed for MEDLINE]
Free Article
9.

Diversity arrays technology: a generic genome profiling technology on open platforms.

Kilian A, Wenzl P, Huttner E, Carling J, Xia L, Blois H, Caig V, Heller-Uszynska K, Jaccoud D, Hopper C, Aschenbrenner-Kilian M, Evers M, Peng K, Cayla C, Hok P, Uszynski G.

Methods Mol Biol. 2012;888:67-89. doi: 10.1007/978-1-61779-870-2_5.

PMID:
22665276
[PubMed - indexed for MEDLINE]
10.

A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection.

Bonin A, Paris M, Despr├ęs L, Tetreau G, David JP, Kilian A.

BMC Genomics. 2008 Oct 6;9:459. doi: 10.1186/1471-2164-9-459.

PMID:
18837997
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Detection of genome-wide polymorphisms in the AT-rich Plasmodium falciparum genome using a high-density microarray.

Jiang H, Yi M, Mu J, Zhang L, Ivens A, Klimczak LJ, Huyen Y, Stephens RM, Su XZ.

BMC Genomics. 2008 Aug 25;9:398. doi: 10.1186/1471-2164-9-398.

PMID:
18724869
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Quantitative trait loci for IQ and other complex traits: single-nucleotide polymorphism genotyping using pooled DNA and microarrays.

Craig I, Plomin R.

Genes Brain Behav. 2006;5 Suppl 1:32-7. Review.

PMID:
16417615
[PubMed - indexed for MEDLINE]
13.

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

Xiao Y, Segal MR, Yang YH, Yeh RF.

Bioinformatics. 2007 Jun 15;23(12):1459-67. Epub 2007 Apr 25.

PMID:
17459966
[PubMed - indexed for MEDLINE]
Free Article
14.

Application of oligonucleotide arrays to high-content genetic analysis.

Gibson NJ.

Expert Rev Mol Diagn. 2006 May;6(3):451-64. Review.

PMID:
16706746
[PubMed - indexed for MEDLINE]
15.

Signs of adaptation to local pH conditions across an environmental mosaic in the California Current Ecosystem.

Pespeni MH, Chan F, Menge BA, Palumbi SR.

Integr Comp Biol. 2013 Nov;53(5):857-70. doi: 10.1093/icb/ict094. Epub 2013 Aug 26. Review.

PMID:
23980118
[PubMed - indexed for MEDLINE]
16.

SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays.

Hua J, Craig DW, Brun M, Webster J, Zismann V, Tembe W, Joshipura K, Huentelman MJ, Dougherty ER, Stephan DA.

Bioinformatics. 2007 Jan 1;23(1):57-63. Epub 2006 Oct 24.

PMID:
17062589
[PubMed - indexed for MEDLINE]
Free Article
17.

High-throughput single nucleotide polymorphism genotyping using nanofluidic Dynamic Arrays.

Wang J, Lin M, Crenshaw A, Hutchinson A, Hicks B, Yeager M, Berndt S, Huang WY, Hayes RB, Chanock SJ, Jones RC, Ramakrishnan R.

BMC Genomics. 2009 Nov 28;10:561. doi: 10.1186/1471-2164-10-561.

PMID:
19943955
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genotyping platforms for mass-throughput genotyping with SNPs, including human genome-wide scans.

Maresso K, Broeckel U.

Adv Genet. 2008;60:107-39. doi: 10.1016/S0065-2660(07)00405-1. Review.

PMID:
18358318
[PubMed - indexed for MEDLINE]
19.

Indel arrays: an affordable alternative for genotyping.

Salathia N, Lee HN, Sangster TA, Morneau K, Landry CR, Schellenberg K, Behere AS, Gunderson KL, Cavalieri D, Jander G, Queitsch C.

Plant J. 2007 Aug;51(4):727-37. Epub 2007 Jul 20.

PMID:
17645438
[PubMed - indexed for MEDLINE]
20.

Unexpected diversity displayed in cDNAs expressed by the immune cells of the purple sea urchin, Strongylocentrotus purpuratus.

Terwilliger DP, Buckley KM, Mehta D, Moorjani PG, Smith LC.

Physiol Genomics. 2006 Jul 12;26(2):134-44.

PMID:
16837652
[PubMed - indexed for MEDLINE]
Free Article

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