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Results: 1 to 20 of 74

1.

A novel and universal method for microRNA RT-qPCR data normalization.

Mestdagh P, Van Vlierberghe P, De Weer A, Muth D, Westermann F, Speleman F, Vandesompele J.

Genome Biol. 2009;10(6):R64. doi: 10.1186/gb-2009-10-6-r64. Epub 2009 Jun 16.

PMID:
19531210
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Expression profiling of microRNA using real-time quantitative PCR, how to use it and what is available.

Benes V, Castoldi M.

Methods. 2010 Apr;50(4):244-9. doi: 10.1016/j.ymeth.2010.01.026. Epub 2010 Jan 28. Review.

PMID:
20109550
[PubMed - indexed for MEDLINE]
4.

High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA.

Mestdagh P, Feys T, Bernard N, Guenther S, Chen C, Speleman F, Vandesompele J.

Nucleic Acids Res. 2008 Dec;36(21):e143. doi: 10.1093/nar/gkn725. Epub 2008 Oct 21.

PMID:
18940866
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Expression patterns of microRNAs are altered in hypoxic human neuroblastoma cells.

Yamagata T, Yoshizawa J, Ohashi S, Yanaga K, Ohki T.

Pediatr Surg Int. 2010 Dec;26(12):1179-84. doi: 10.1007/s00383-010-2700-8. Epub 2010 Aug 31.

PMID:
20809117
[PubMed - indexed for MEDLINE]
6.

Normalization strategies for microRNA profiling experiments: a 'normal' way to a hidden layer of complexity?

Meyer SU, Pfaffl MW, Ulbrich SE.

Biotechnol Lett. 2010 Dec;32(12):1777-88. doi: 10.1007/s10529-010-0380-z. Epub 2010 Aug 12.

PMID:
20703800
[PubMed - indexed for MEDLINE]
7.

An extension of the Wilcoxon-Mann-Whitney test for analyzing RT-qPCR data.

De Neve J, Thas O, Ottoy JP, Clement L.

Stat Appl Genet Mol Biol. 2013 Jun;12(3):333-46. doi: 10.1515/sagmb-2012-0003.

PMID:
23652635
[PubMed - indexed for MEDLINE]
8.

Reverse transcription-quantitative polymerase chain reaction: description of a RIN-based algorithm for accurate data normalization.

Ho-Pun-Cheung A, Bascoul-Mollevi C, Assenat E, Boissière-Michot F, Bibeau F, Cellier D, Ychou M, Lopez-Crapez E.

BMC Mol Biol. 2009 Apr 15;10:31. doi: 10.1186/1471-2199-10-31.

PMID:
19368728
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.

Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F.

Genome Biol. 2002 Jun 18;3(7):RESEARCH0034. Epub 2002 Jun 18.

PMID:
12184808
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Clinical significance of a highly sensitive analysis for gene dosage and the expression level of MYCN in neuroblastoma.

Tanaka S, Tajiri T, Noguchi S, Shono K, Ihara K, Hara T, Suita S.

J Pediatr Surg. 2004 Jan;39(1):63-8.

PMID:
14694373
[PubMed - indexed for MEDLINE]
11.

Validation and application of normalization factors for gene expression studies in rubella virus-infected cell lines with quantitative real-time PCR.

Chey S, Claus C, Liebert UG.

J Cell Biochem. 2010 May;110(1):118-28. doi: 10.1002/jcb.22518.

PMID:
20217898
[PubMed - indexed for MEDLINE]
12.

Whole-genome RT-qPCR microRNA expression profiling.

Mestdagh P, Derveaux S, Vandesompele J.

Methods Mol Biol. 2012;815:121-30. doi: 10.1007/978-1-61779-424-7_10.

PMID:
22130988
[PubMed - indexed for MEDLINE]
13.

Biological diagnosis for neuroblastoma using the combination of highly sensitive analysis of prognostic factors.

Tajiri T, Tanaka S, Higashi M, Kinoshita Y, Takahashi Y, Tatsuta K, Suita S.

J Pediatr Surg. 2006 Mar;41(3):560-6.

PMID:
16516635
[PubMed - indexed for MEDLINE]
14.

Vasoactive intestinal peptide decreases MYCN expression and synergizes with retinoic acid in a human MYCN-amplified neuroblastoma cell line.

Chevrier L, Meunier AC, Cochaud S, Muller JM, Chadéneau C.

Int J Oncol. 2008 Nov;33(5):1081-9.

PMID:
18949372
[PubMed - indexed for MEDLINE]
15.

Cross-study analysis of gene expression data for intermediate neuroblastoma identifies two biological subtypes.

Warnat P, Oberthuer A, Fischer M, Westermann F, Eils R, Brors B.

BMC Cancer. 2007 May 25;7:89. Review.

PMID:
17531100
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Classification of neuroblastomas based on an analysis of the expression of genes related to prognosis.

Tajiri T, Higashi M, Souzaki R, Tatsuta K, Kinoshita Y, Taguchi T.

J Pediatr Surg. 2007 Dec;42(12):2046-9.

PMID:
18082705
[PubMed - indexed for MEDLINE]
17.

Expression of a MYCN-interacting isoform of the tumor suppressor BIN1 is reduced in neuroblastomas with unfavorable biological features.

Tajiri T, Liu X, Thompson PM, Tanaka S, Suita S, Zhao H, Maris JM, Prendergast GC, Hogarty MD.

Clin Cancer Res. 2003 Aug 15;9(9):3345-55.

PMID:
12960121
[PubMed - indexed for MEDLINE]
Free Article
18.

Genome-wide microRNA expression profiling in renal cell carcinoma: significant down-regulation of miR-141 and miR-200c.

Nakada C, Matsuura K, Tsukamoto Y, Tanigawa M, Yoshimoto T, Narimatsu T, Nguyen LT, Hijiya N, Uchida T, Sato F, Mimata H, Seto M, Moriyama M.

J Pathol. 2008 Dec;216(4):418-27. doi: 10.1002/path.2437.

PMID:
18925646
[PubMed - indexed for MEDLINE]
19.

Normalization of microRNA quantitative RT-PCR data in reduced scale experimental designs.

Latham GJ.

Methods Mol Biol. 2010;667:19-31. doi: 10.1007/978-1-60761-811-9_2.

PMID:
20827524
[PubMed - indexed for MEDLINE]
20.

Prognostic value of MYCN and ID2 overexpression in neuroblastoma.

Alaminos M, Gerald WL, Cheung NK.

Pediatr Blood Cancer. 2005 Dec;45(7):909-15.

PMID:
16047351
[PubMed - indexed for MEDLINE]

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