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Results: 1 to 20 of 179

1.

Microbial co-habitation and lateral gene transfer: what transposases can tell us.

Hooper SD, Mavromatis K, Kyrpides NC.

Genome Biol. 2009;10(4):R45. doi: 10.1186/gb-2009-10-4-r45. Epub 2009 Apr 24.

PMID:
19393086
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Quantitative phylogenetic assessment of microbial communities in diverse environments.

von Mering C, Hugenholtz P, Raes J, Tringe SG, Doerks T, Jensen LJ, Ward N, Bork P.

Science. 2007 Feb 23;315(5815):1126-30. Epub 2007 Feb 1.

PMID:
17272687
[PubMed - indexed for MEDLINE]
Free Article
3.

Bacterial phylogeny structures soil resistomes across habitats.

Forsberg KJ, Patel S, Gibson MK, Lauber CL, Knight R, Fierer N, Dantas G.

Nature. 2014 May 29;509(7502):612-6. doi: 10.1038/nature13377. Epub 2014 May 21.

PMID:
24847883
[PubMed - indexed for MEDLINE]
4.

A molecular study of microbe transfer between distant environments.

Hooper SD, Raes J, Foerstner KU, Harrington ED, Dalevi D, Bork P.

PLoS One. 2008 Jul 9;3(7):e2607. doi: 10.1371/journal.pone.0002607.

PMID:
18612393
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Detecting lateral genetic transfer : a phylogenetic approach.

Beiko RG, Ragan MA.

Methods Mol Biol. 2008;452:457-69. doi: 10.1007/978-1-60327-159-2_21. Review.

PMID:
18566777
[PubMed - indexed for MEDLINE]
6.

The rate and pattern of cladogenesis in microbes.

Martin AP, Costello EK, Meyer AF, Nemergut DR, Schmidt SK.

Evolution. 2004 May;58(5):946-55.

PMID:
15212376
[PubMed - indexed for MEDLINE]
7.

Lateral gene transfer challenges principles of microbial systematics.

Bapteste E, Boucher Y.

Trends Microbiol. 2008 May;16(5):200-7. doi: 10.1016/j.tim.2008.02.005. Epub 2008 Apr 15.

PMID:
18420414
[PubMed - indexed for MEDLINE]
8.

Examining bacterial species under the specter of gene transfer and exchange.

Ochman H, Lerat E, Daubin V.

Proc Natl Acad Sci U S A. 2005 May 3;102 Suppl 1:6595-9. Epub 2005 Apr 25. Review.

PMID:
15851673
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Habitat heterogeneity and associated microbial community structure in a small-scale floodplain hyporheic flow path.

Lowell JL, Gordon N, Engstrom D, Stanford JA, Holben WE, Gannon JE.

Microb Ecol. 2009 Oct;58(3):611-20. doi: 10.1007/s00248-009-9525-9. Epub 2009 May 22.

PMID:
19462196
[PubMed - indexed for MEDLINE]
10.

Putative transposases conserved in Exiguobacterium isolates from ancient Siberian permafrost and from contemporary surface habitats.

Vishnivetskaya TA, Kathariou S.

Appl Environ Microbiol. 2005 Nov;71(11):6954-62.

PMID:
16269730
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Proteogenomic approaches for the molecular characterization of natural microbial communities.

Banfield JF, Verberkmoes NC, Hettich RL, Thelen MP.

OMICS. 2005 Winter;9(4):301-33.

PMID:
16402891
[PubMed - indexed for MEDLINE]
12.

Short-term microbial and physico-chemical variability in low-temperature hydrothermal fluids near 5 degrees S on the Mid-Atlantic Ridge.

Perner M, Bach W, Hentscher M, Koschinsky A, Garbe-Schönberg D, Streit WR, Strauss H.

Environ Microbiol. 2009 Oct;11(10):2526-41. doi: 10.1111/j.1462-2920.2009.01978.x. Epub 2009 Jun 24.

PMID:
19558512
[PubMed - indexed for MEDLINE]
13.

On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer.

Yin Y, Fischer D.

BMC Evol Biol. 2006 Aug 16;6:63.

PMID:
16914045
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Role of horizontal gene transfer in the evolution of plant parasitism among nematodes.

Mitreva M, Smant G, Helder J.

Methods Mol Biol. 2009;532:517-35. doi: 10.1007/978-1-60327-853-9_30. Review.

PMID:
19271205
[PubMed - indexed for MEDLINE]
15.

Potential for horizontal gene transfer in microbial communities of the terrestrial subsurface.

Coombs JM.

Methods Mol Biol. 2009;532:413-33. doi: 10.1007/978-1-60327-853-9_24. Review.

PMID:
19271199
[PubMed - indexed for MEDLINE]
16.

The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics.

Shade A, Jones SE, McMahon KD.

Environ Microbiol. 2008 Apr;10(4):1057-67. doi: 10.1111/j.1462-2920.2007.01527.x. Epub 2008 Jan 23.

PMID:
18218031
[PubMed - indexed for MEDLINE]
17.

Estimating the extent of horizontal gene transfer in metagenomic sequences.

Tamames J, Moya A.

BMC Genomics. 2008 Mar 24;9:136. doi: 10.1186/1471-2164-9-136.

PMID:
18366724
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genome-wide experimental determination of barriers to horizontal gene transfer.

Sorek R, Zhu Y, Creevey CJ, Francino MP, Bork P, Rubin EM.

Science. 2007 Nov 30;318(5855):1449-52. Epub 2007 Oct 18.

PMID:
17947550
[PubMed - indexed for MEDLINE]
Free Article
19.

The maturing of microbial ecology.

Schmidt TM.

Int Microbiol. 2006 Sep;9(3):217-23. Review.

PMID:
17061212
[PubMed - indexed for MEDLINE]
Free Article
20.

Microbial community response to seawater amendment in low-salinity tidal sediments.

Edmonds JW, Weston NB, Joye SB, Mou X, Moran MA.

Microb Ecol. 2009 Oct;58(3):558-68. doi: 10.1007/s00248-009-9556-2. Epub 2009 Jul 22.

PMID:
19629578
[PubMed - indexed for MEDLINE]

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