Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 62

1.

GMODWeb: a web framework for the Generic Model Organism Database.

O'Connor BD, Day A, Cain S, Arnaiz O, Sperling L, Stein LD.

Genome Biol. 2008;9(6):R102. doi: 10.1186/gb-2008-9-6-r102. Epub 2008 Jun 20.

PMID:
18570664
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The generic genome browser: a building block for a model organism system database.

Stein LD, Mungall C, Shu S, Caudy M, Mangone M, Day A, Nickerson E, Stajich JE, Harris TW, Arva A, Lewis S.

Genome Res. 2002 Oct;12(10):1599-610.

PMID:
12368253
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Xanthusbase: adapting wikipedia principles to a model organism database.

Arshinoff BI, Suen G, Just EM, Merchant SM, Kibbe WA, Chisholm RL, Welch RD.

Nucleic Acids Res. 2007 Jan;35(Database issue):D422-6. Epub 2006 Nov 7.

PMID:
17090585
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database.

Carver T, Berriman M, Tivey A, Patel C, Böhme U, Barrell BG, Parkhill J, Rajandream MA.

Bioinformatics. 2008 Dec 1;24(23):2672-6. doi: 10.1093/bioinformatics/btn529. Epub 2008 Oct 9.

PMID:
18845581
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The Pathway Tools software.

Karp PD, Paley S, Romero P.

Bioinformatics. 2002;18 Suppl 1:S225-32.

PMID:
12169551
[PubMed - indexed for MEDLINE]
Free Article
6.

AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome.

Legeai F, Shigenobu S, Gauthier JP, Colbourne J, Rispe C, Collin O, Richards S, Wilson AC, Murphy T, Tagu D.

Insect Mol Biol. 2010 Mar;19 Suppl 2:5-12. doi: 10.1111/j.1365-2583.2009.00930.x.

PMID:
20482635
[PubMed - indexed for MEDLINE]
7.

dictyBase, the model organism database for Dictyostelium discoideum.

Chisholm RL, Gaudet P, Just EM, Pilcher KE, Fey P, Merchant SN, Kibbe WA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D423-7.

PMID:
16381903
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

GeneX Va: VBC open source microarray database and analysis software.

Lee JK, Laudeman T, Kanter J, James T, Siadaty MS, Knaus WA, Prorok A, Bao Y, Freeman B, Puiu D, Wen LM, Buck GA, Schlauch K, Weller J, Fox JW.

Biotechniques. 2004 Apr;36(4):634-8, 640, 642.

PMID:
15088382
[PubMed - indexed for MEDLINE]
9.

WholeCellKB: model organism databases for comprehensive whole-cell models.

Karr JR, Sanghvi JC, Macklin DN, Arora A, Covert MW.

Nucleic Acids Res. 2013 Jan;41(Database issue):D787-92. doi: 10.1093/nar/gks1108. Epub 2012 Nov 21.

PMID:
23175606
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

SmedGD: the Schmidtea mediterranea genome database.

Robb SM, Ross E, Sánchez Alvarado A.

Nucleic Acids Res. 2008 Jan;36(Database issue):D599-606. Epub 2007 Sep 18.

PMID:
17881371
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Apollo: a community resource for genome annotation editing.

Lee E, Harris N, Gibson M, Chetty R, Lewis S.

Bioinformatics. 2009 Jul 15;25(14):1836-7. doi: 10.1093/bioinformatics/btp314. Epub 2009 May 13.

PMID:
19439563
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and dissemination.

Hancock D, Wilson M, Velarde G, Morrison N, Hayes A, Hulme H, Wood AJ, Nashar K, Kell DB, Brass A.

BMC Bioinformatics. 2005 Nov 3;6:264.

PMID:
16269077
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

SubtiList: the reference database for the Bacillus subtilis genome.

Moszer I, Jones LM, Moreira S, Fabry C, Danchin A.

Nucleic Acids Res. 2002 Jan 1;30(1):62-5.

PMID:
11752255
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Canto: an online tool for community literature curation.

Rutherford KM, Harris MA, Lock A, Oliver SG, Wood V.

Bioinformatics. 2014 Jun 15;30(12):1791-2. doi: 10.1093/bioinformatics/btu103. Epub 2014 Feb 25.

PMID:
24574118
[PubMed - in process]
Free PMC Article
15.

BioModels.net Web Services, a free and integrated toolkit for computational modelling software.

Li C, Courtot M, Le Novère N, Laibe C.

Brief Bioinform. 2010 May;11(3):270-7. doi: 10.1093/bib/bbp056. Epub 2009 Nov 25.

PMID:
19939940
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Using the Generic Genome Browser (GBrowse).

Donlin MJ.

Curr Protoc Bioinformatics. 2009 Dec;Chapter 9:Unit 9.9. doi: 10.1002/0471250953.bi0909s28.

PMID:
19957275
[PubMed - indexed for MEDLINE]
17.

JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.

Latorre M, Silva H, Saba J, Guziolowski C, Vizoso P, Martinez V, Maldonado J, Morales A, Caroca R, Cambiazo V, Campos-Vargas R, Gonzalez M, Orellana A, Retamales J, Meisel LA.

BMC Bioinformatics. 2006 Nov 23;7:513.

PMID:
17123449
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

An XML message broker framework for exchange and integration of microarray data.

Tjandra D, Wong S, Shen W, Pulliam B, Yu E, Esserman L.

Bioinformatics. 2003 Sep 22;19(14):1844-5.

PMID:
14512357
[PubMed - indexed for MEDLINE]
Free Article
19.

The Ensembl Web site: mechanics of a genome browser.

Stalker J, Gibbins B, Meidl P, Smith J, Spooner W, Hotz HR, Cox AV.

Genome Res. 2004 May;14(5):951-5.

PMID:
15123591
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models.

Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C.

BMC Syst Biol. 2010 Jun 29;4:92. doi: 10.1186/1752-0509-4-92.

PMID:
20587024
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk