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Results: 1 to 20 of 101

1.

Cross-kingdom patterns of alternative splicing and splice recognition.

McGuire AM, Pearson MD, Neafsey DE, Galagan JE.

Genome Biol. 2008;9(3):R50. doi: 10.1186/gb-2008-9-3-r50. Epub 2008 Mar 5.

PMID:
18321378
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Origin and evolution of spliceosomal introns.

Rogozin IB, Carmel L, Csuros M, Koonin EV.

Biol Direct. 2012 Apr 16;7:11. doi: 10.1186/1745-6150-7-11. Review.

PMID:
22507701
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Human GC-AG alternative intron isoforms with weak donor sites show enhanced consensus at acceptor exon positions.

Thanaraj TA, Clark F.

Nucleic Acids Res. 2001 Jun 15;29(12):2581-93.

PMID:
11410667
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns.

Dewey CN, Rogozin IB, Koonin EV.

BMC Genomics. 2006 Dec 8;7:311.

PMID:
17156453
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The effect of intron length on exon creation ratios during the evolution of mammalian genomes.

Roy M, Kim N, Xing Y, Lee C.

RNA. 2008 Nov;14(11):2261-73. doi: 10.1261/rna.1024908. Epub 2008 Sep 16.

PMID:
18796579
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Categorization and characterization of transcript-confirmed constitutively and alternatively spliced introns and exons from human.

Clark F, Thanaraj TA.

Hum Mol Genet. 2002 Feb 15;11(4):451-64.

PMID:
11854178
[PubMed - indexed for MEDLINE]
Free Article
7.

Evolutionary convergence on highly-conserved 3' intron structures in intron-poor eukaryotes and insights into the ancestral eukaryotic genome.

Irimia M, Roy SW.

PLoS Genet. 2008 Aug 8;4(8):e1000148. doi: 10.1371/journal.pgen.1000148.

PMID:
18688272
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii.

Labadorf A, Link A, Rogers MF, Thomas J, Reddy AS, Ben-Hur A.

BMC Genomics. 2010 Feb 17;11:114. doi: 10.1186/1471-2164-11-114.

PMID:
20163725
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Investigating the intron recognition mechanism in eukaryotes.

Collins L, Penny D; SMBE Tri-National Young Investigators.

Mol Biol Evol. 2006 May;23(5):901-10. Epub 2005 Dec 21.

PMID:
16371412
[PubMed - indexed for MEDLINE]
Free Article
10.

Different levels of alternative splicing among eukaryotes.

Kim E, Magen A, Ast G.

Nucleic Acids Res. 2007;35(1):125-31. Epub 2006 Dec 7.

PMID:
17158149
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A systematic analysis of intronic sequences downstream of 5' splice sites reveals a widespread role for U-rich motifs and TIA1/TIAL1 proteins in alternative splicing regulation.

Aznarez I, Barash Y, Shai O, He D, Zielenski J, Tsui LC, Parkinson J, Frey BJ, Rommens JM, Blencowe BJ.

Genome Res. 2008 Aug;18(8):1247-58. doi: 10.1101/gr.073155.107. Epub 2008 May 2.

PMID:
18456862
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Coevolution of genomic intron number and splice sites.

Irimia M, Penny D, Roy SW.

Trends Genet. 2007 Jul;23(7):321-5. Epub 2007 Apr 18. Review.

PMID:
17442445
[PubMed - indexed for MEDLINE]
13.

Characterization of intronic structures and alternative splicing in Phytophthora sojae by comparative analysis of expressed sequence tags and genomic sequences.

Shen D, Ye W, Dong S, Wang Y, Dou D.

Can J Microbiol. 2011 Feb;57(2):84-90. doi: 10.1139/w10-103.

PMID:
21326350
[PubMed - indexed for MEDLINE]
14.
15.

Changes in exon-intron structure during vertebrate evolution affect the splicing pattern of exons.

Gelfman S, Burstein D, Penn O, Savchenko A, Amit M, Schwartz S, Pupko T, Ast G.

Genome Res. 2012 Jan;22(1):35-50. doi: 10.1101/gr.119834.110. Epub 2011 Oct 5.

PMID:
21974994
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Translational control of intron splicing in eukaryotes.

Jaillon O, Bouhouche K, Gout JF, Aury JM, Noel B, Saudemont B, Nowacki M, Serrano V, Porcel BM, Ségurens B, Le Mouël A, Lepère G, Schächter V, Bétermier M, Cohen J, Wincker P, Sperling L, Duret L, Meyer E.

Nature. 2008 Jan 17;451(7176):359-62. doi: 10.1038/nature06495.

PMID:
18202663
[PubMed - indexed for MEDLINE]
17.

Cotranscriptional splicing efficiency differs dramatically between Drosophila and mouse.

Khodor YL, Menet JS, Tolan M, Rosbash M.

RNA. 2012 Dec;18(12):2174-86. doi: 10.1261/rna.034090.112. Epub 2012 Oct 24.

PMID:
23097425
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Alternative splicing regulation at tandem 3' splice sites.

Akerman M, Mandel-Gutfreund Y.

Nucleic Acids Res. 2006 Jan 3;34(1):23-31. Print 2006.

PMID:
16394021
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Splicing of constitutive upstream introns is essential for the recognition of intra-exonic suboptimal splice sites in the thrombopoietin gene.

Romano M, Marcucci R, Baralle FE.

Nucleic Acids Res. 2001 Feb 15;29(4):886-94.

PMID:
11160920
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Interactions across exons can influence splice site recognition in plant nuclei.

McCullough AJ, Baynton CE, Schuler MA.

Plant Cell. 1996 Dec;8(12):2295-307.

PMID:
8989884
[PubMed - indexed for MEDLINE]
Free PMC Article

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