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Results: 1 to 20 of 105

1.

Identification of novel regulatory factor X (RFX) target genes by comparative genomics in Drosophila species.

Laurençon A, Dubruille R, Efimenko E, Grenier G, Bissett R, Cortier E, Rolland V, Swoboda P, Durand B.

Genome Biol. 2007;8(9):R195.

PMID:
17875208
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The in vivo dissection of direct RFX-target gene promoters in C. elegans reveals a novel cis-regulatory element, the C-box.

Burghoorn J, Piasecki BP, Crona F, Phirke P, Jeppsson KE, Swoboda P.

Dev Biol. 2012 Aug 15;368(2):415-26. doi: 10.1016/j.ydbio.2012.05.033. Epub 2012 Jun 5.

PMID:
22683808
[PubMed - indexed for MEDLINE]
Free Article
3.

Identification of ciliary and ciliopathy genes in Caenorhabditis elegans through comparative genomics.

Chen N, Mah A, Blacque OE, Chu J, Phgora K, Bakhoum MW, Newbury CR, Khattra J, Chan S, Go A, Efimenko E, Johnsen R, Phirke P, Swoboda P, Marra M, Moerman DG, Leroux MR, Baillie DL, Stein LD.

Genome Biol. 2006;7(12):R126.

PMID:
17187676
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Fine tuning of RFX/DAF-19-regulated target gene expression through binding to multiple sites in Caenorhabditis elegans.

Chu JS, Tarailo-Graovac M, Zhang D, Wang J, Uyar B, Tu D, Trinh J, Baillie DL, Chen N.

Nucleic Acids Res. 2012 Jan;40(1):53-64. doi: 10.1093/nar/gkr690. Epub 2011 Sep 8.

PMID:
21908398
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Regulatory Factor X (RFX)-mediated transcriptional rewiring of ciliary genes in animals.

Piasecki BP, Burghoorn J, Swoboda P.

Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):12969-74. doi: 10.1073/pnas.0914241107. Epub 2010 Jul 6.

PMID:
20615967
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Cloning and characterization of dRFX, the Drosophila member of the RFX family of transcription factors.

Durand B, Vandaele C, Spencer D, Pantalacci S, Couble P.

Gene. 2000 Apr 4;246(1-2):285-93.

PMID:
10767550
[PubMed - indexed for MEDLINE]
7.

Functional specialization of sensory cilia by an RFX transcription factor isoform.

Wang J, Schwartz HT, Barr MM.

Genetics. 2010 Dec;186(4):1295-307. doi: 10.1534/genetics.110.122879. Epub 2010 Oct 5.

PMID:
20923979
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Drosophila regulatory factor X is necessary for ciliated sensory neuron differentiation.

Dubruille R, Laurençon A, Vandaele C, Shishido E, Coulon-Bublex M, Swoboda P, Couble P, Kernan M, Durand B.

Development. 2002 Dec;129(23):5487-98.

PMID:
12403718
[PubMed - indexed for MEDLINE]
Free Article
9.

Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura.

Berman BP, Pfeiffer BD, Laverty TR, Salzberg SL, Rubin GM, Eisen MB, Celniker SE.

Genome Biol. 2004;5(9):R61. Epub 2004 Aug 20.

PMID:
15345045
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

The RFX-type transcription factor DAF-19 regulates sensory neuron cilium formation in C. elegans.

Swoboda P, Adler HT, Thomas JH.

Mol Cell. 2000 Mar;5(3):411-21.

PMID:
10882127
[PubMed - indexed for MEDLINE]
Free Article
11.

Transcription control of a gene for Drosophila transcription factor, DREF by DRE and cis-elements conserved between Drosophila melanogaster and virilis.

Kwon E, Seto H, Hirose F, Ohshima N, Takahashi Y, Nishida Y, Yamaguchi M.

Gene. 2003 May 8;309(2):101-16.

PMID:
12758126
[PubMed - indexed for MEDLINE]
12.

The gene regulatory cascade linking proneural specification with differentiation in Drosophila sensory neurons.

Cachero S, Simpson TI, Zur Lage PI, Ma L, Newton FG, Holohan EE, Armstrong JD, Jarman AP.

PLoS Biol. 2011 Jan 4;9(1):e1000568. doi: 10.1371/journal.pbio.1000568.

PMID:
21283833
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Finding ciliary genes: a computational approach.

Henriksson J, Piasecki BP, Lend K, Bürglin TR, Swoboda P.

Methods Enzymol. 2013;525:327-50. doi: 10.1016/B978-0-12-397944-5.00016-X.

PMID:
23522477
[PubMed - indexed for MEDLINE]
14.

Analysis of xbx genes in C. elegans.

Efimenko E, Bubb K, Mak HY, Holzman T, Leroux MR, Ruvkun G, Thomas JH, Swoboda P.

Development. 2005 Apr;132(8):1923-34.

PMID:
15790967
[PubMed - indexed for MEDLINE]
Free Article
15.

Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods.

GuhaThakurta D, Palomar L, Stormo GD, Tedesco P, Johnson TE, Walker DW, Lithgow G, Kim S, Link CD.

Genome Res. 2002 May;12(5):701-12. Erratum in: Genome Res 2002 Aug;12(8):1301.

PMID:
11997337
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

RFX proteins, a novel family of DNA binding proteins conserved in the eukaryotic kingdom.

Emery P, Durand B, Mach B, Reith W.

Nucleic Acids Res. 1996 Mar 1;24(5):803-7.

PMID:
8600444
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Brachyury proteins regulate target genes through modular binding sites in a cooperative fashion.

Kusch T, Storck T, Walldorf U, Reuter R.

Genes Dev. 2002 Feb 15;16(4):518-29.

PMID:
11850413
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

RFX3 governs growth and beating efficiency of motile cilia in mouse and controls the expression of genes involved in human ciliopathies.

El Zein L, Ait-Lounis A, Morlé L, Thomas J, Chhin B, Spassky N, Reith W, Durand B.

J Cell Sci. 2009 Sep 1;122(Pt 17):3180-9. doi: 10.1242/jcs.048348. Epub 2009 Aug 11.

PMID:
19671664
[PubMed - indexed for MEDLINE]
Free Article
19.

Identification and characterization of novel human tissue-specific RFX transcription factors.

Aftab S, Semenec L, Chu JS, Chen N.

BMC Evol Biol. 2008 Aug 1;8:226. doi: 10.1186/1471-2148-8-226.

PMID:
18673564
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

MHC class II regulatory factor RFX has a novel DNA-binding domain and a functionally independent dimerization domain.

Reith W, Herrero-Sanchez C, Kobr M, Silacci P, Berte C, Barras E, Fey S, Mach B.

Genes Dev. 1990 Sep;4(9):1528-40.

PMID:
2253877
[PubMed - indexed for MEDLINE]
Free Article

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